KEGG   Yersinia enterocolitica FORC_002: FORC2_3819
Entry
FORC2_3819        CDS       T03890                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
yef  Yersinia enterocolitica FORC_002
Pathway
yef03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:yef00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    FORC2_3819
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:yef03021]
    FORC2_3819
   03400 DNA repair and recombination proteins [BR:yef03400]
    FORC2_3819
Enzymes [BR:yef01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     FORC2_3819
Transcription machinery [BR:yef03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     FORC2_3819
DNA repair and recombination proteins [BR:yef03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      FORC2_3819
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 Cas_Cas2CT1978
Other DBs
NCBI-ProteinID: AKF39966
UniProt: A0A0E8MXQ6
Position
complement(4354885..4358913)
AA seq 1342 aa
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNFTTAQILDLFFEKVVFEIRDNKLQME
LVPERLRGETASFDIEANGKVYVEKARRITARHIRQLEKDGIDRIEVPVEYIAGKVVAKD
YIDENTGELICAANMELSLDLLAKLSQAGHKQIETLFTNDLDHGAYISETLRVDPTSDRL
SALVEIYRMMRPGEPPTREAAENLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKEDITEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRRVRDGVVT
DEINYLSAIEEGNFVIAQANSNLDEDGRFIEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTSVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVNLGEPIERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
TEELQILEAGLFARIHAVLVSGGIEADKLSKLPRDRWLELGLTDEDKQNQLEQLAEQYDE
MKSEFEKKMDAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGEKINAMLKKQEEVAK
LREFIQKAYDLGDSVCQKVDLSTFTDDEVLRLAENLKKGMPIATPVFDGATEKEIKELLQ
LGGLPTSGQITLFDGRTGEQFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEPGMP
ESFNVLLKEIRSLGINIELEEE
NT seq 4029 nt   +upstreamnt  +downstreamnt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttttggacataccttatctcctttctatccaacttgactcgttccagaaatttatcgag
caagatcctgaaggacagtacggcctggaagcagcattccgttctgttttcccaatccag
agctacagcggcaattcggagctgcaatacgttagctaccgtcttggtgagccagtattt
gacgtcaaagagtgccagatccgtggtgtgacttattccgcaccgctgcgcgtaaaactg
cgcctggtcatctatgagcgcgaagccccggaaggtacggtcaaagacatcaaagaacaa
gaagtctacatgggtgaaattccactcatgaccgaaaacggtacctttgtcattaatggt
actgagagggttatcgtatctcagctgcatcgtagtcctggcgtattctttgacagtgat
aagggtaaaacccattcatcgggtaaagtgctgtataacgcacgtatcatcccttaccgc
ggttcatggttagatttcgagtttgacccgaaagacaacctgtttgtccgtattgaccgt
cgtcgtaagctgccggcaaccatcattctgcgtgcattgaatttcaccactgcacagatc
ctggatctgttctttgaaaaagtggtctttgagattcgtgacaacaagctgcagatggaa
ttggttcctgagcgcctgcgcggtgaaacggcatcctttgatattgaagcgaatggcaaa
gtttacgtcgagaaagctcgtcgtattactgctcgccatattcgccagcttgaaaaagac
ggcattgatcgcatcgaagttccggttgaatacattgccggtaaagtggtcgctaaagac
tacatcgatgagaacactggtgagcttatctgtgcagccaacatggagctgtcactagat
ttgctggctaaactgagccaagccggtcacaagcaaatcgaaacattgttcaccaacgac
ttggatcacggtgcttatatctccgagaccctgcgtgttgatccaaccagcgatcgtctg
agcgctttggttgagatttaccgcatgatgcgtcctggtgagccaccaacacgtgaagca
gctgaaaacctgtttgagaacctgttcttctctgaagaccgctatgatttgtcagcggtt
ggccggatgaagttcaaccgttcactgctgcgcgacgagatcgaaggttccggtatcctg
agcaaagaagacatcactgaagtgatgaagaagctcatcgatatccgtaacggtaaaggc
gaagtggatgatatcgaccacttaggcaaccgtcgtattcgttccgttggtgaaatggct
gaaaaccagttccgtgttggtctggttcgtgttgagcgtgcagttaaagagcgtttgtct
ctgggcgacctcgacacactgatgcctcaggacatgatcaacgccaagcctatttcggct
gcggtgaaagagttctttggttccagccagttgtcacaatttatggaccagaacaacccg
ttgtctgagattacgcataaacgccgtatctctgcattgggcccgggcggtttgacccgt
gaacgtgctggctttgaagttcgagacgtacacccgactcactacggtcgcgtatgtcca
atcgaaacgccagaaggtccaaacatcggtctgatcaactccttgtccgtgtacgcacag
accaacgagtatggtttcctggaaaccccttatcgtcgcgtgcgcgatggtgtggtgacc
gatgaaattaactatctgtctgctattgaagaaggcaacttcgttatcgctcaggcgaac
tccaacctggacgaagacggccgcttcatcgaagacttggtcacttgtcgtagcaaaggc
gaatcaagcctgttcagccgcgatcaagttgactacatggacgtttccactcaacaggtg
gtgtccgttggtgcttctctgattccattcctggaacacgatgacgccaaccgcgccttg
atgggtgcgaacatgcaacgtcaggcagttcctactctgcgtgctgataagccgttggtg
ggtactggtatggaacgtgcggtagcggttgactcaggggtaacctctgtagccaaacgt
ggcggtaccgttcagtacgtagatgcatcccgtatcgtgattaaagttaacgaagacgag
atgtatccgggcgaagcaggtattgatatttataacctgaccaaatacacccgttctaac
cagaacacctgtatcaaccagatgccgtgtgtaaatctgggtgagccaatcgagcgcggt
gacgtgctggcagatggcccatcgacagacctgggcgaactggcattgggtcagaacatg
cgtgtagcgttcatgccttggaacggttacaacttcgaagactccatcttggtctccgaa
cgcgtggtgcaagaagatcgcttcacaactatccacattcaggaactggcatgtgtgtct
cgtgacaccaagctggggccagaagagatcactgctgacatcccgaacgtgggtgaagct
gcgctctccaaactggatgaatccggtatcgtgtatatcggtgctgaagtgactggcggc
gacattctggttggtaaggtaacacctaaaggtgaaacccaactgaccccagaagagaag
ctgttacgtgcgatcttcggtgagaaagcgtctgatgttaaagactcttctctgcgtgtt
ccaaacggtgtttctggtacggttatcgatgtacaagtctttactcgcgacggtgtagaa
aaagacaaacgtgcattggaaatcgaagagatgcaactgaagcaggctaagaaagacctg
acggaagagttgcagatcctggaagcgggcttgtttgcacgtatccatgcagtactggtt
tctggtggcatcgaagctgacaagctgagcaaattaccacgtgaccgctggctggaactt
ggcctgactgacgaagacaagcaaaaccagctggaacagttggcagagcaatacgacgaa
atgaaatccgaattcgagaagaagatggatgccaagcgtcgtaagatcacccaaggtgat
gatttagcaccaggcgtgctgaagatcgtcaaggtgtatctggcggttaaacgtcagatt
caaccgggtgacaagatggccggtcgtcacggtaacaaaggtgttatctctaagattaac
ccgatcgaagatatgccttacgatgaaaacggtacgccggtagacatcgttctgaacccg
ctgggcgtaccatcgcgtatgaacatcggtcagattttggaaacccacttagggatggca
gcgaaaggcatcggcgagaaaattaacgccatgctgaaaaagcaggaagaagttgccaaa
ctgcgtgagttcatccagaaagcctacgatctgggcgatagtgtttgtcagaaagttgat
ctgagcaccttcaccgatgacgaagtactgcgtctggctgagaacctgaaaaaaggtatg
ccaatcgcaacaccagtcttcgatggtgcgacagagaaagaaatcaaggaactgttacag
ctgggtggcctgccaacttctggtcagattactctgtttgacggccgtaccggcgagcaa
ttcgaacgtcaggttactgtcggctacatgtacatgctgaaactgaaccacttggttgat
gacaagatgcatgcgcgttctaccggttcttacagcctggttactcagcagccgctgggt
ggtaaggctcagttcggtggtcagcgcttcggtgagatggaagtgtgggcgttggaagct
tatggcgccgcgtacacattgcaggaaatgcttaccgtcaagtccgacgatgtaaacggc
cgtaccaagatgtacaaaaacatcgtggatggcgatcaccgtatggaaccaggcatgccg
gagtccttcaacgtattgttgaaagaaatccgctcgctgggcatcaatatcgagctggaa
gaagagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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