KEGG   Yersinia enterocolitica LC20: LC20_04439
Entry
LC20_04439        CDS       T03179                                 
Name
(GenBank) polynucleotide adenylyltransferase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
yel  Yersinia enterocolitica LC20
Pathway
yel03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:yel00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LC20_04439
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:yel03019]
    LC20_04439
Enzymes [BR:yel01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     LC20_04439
Messenger RNA biogenesis [BR:yel03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     LC20_04439
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: AHM75692
UniProt: A0A7U4GHU4
Position
3851535..3853076
AA seq 513 aa
MFTRVANFCRKVLIRDDKLARDSQTARDDTARDSSARKDIVQGEDNVARKERRPARTNTG
RKNHAEPASQQGSMTIIPRDQHNISRKDISDNALKVLYRLNKSGYEAYLVGGGVRDLLLG
KKPKDFDITTSATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEQQQAEDS
DKNSSQQAQNGMLLRDNIFGTIEDDAQRRDFTINSLYYGISDFALRDYTGGLRDLKEGVI
RLIGSPETRYREDPVRMLRAVRFAAKLDMTISPETAEPIPRLASLLREIPPARLFEESLK
LLQSGYGYKTYLKLCEYQLFQPLFPLIARHFTEHHDSPMERMLVQVLKNTDHRLHNDKRV
NPAFLFAAMLWYPLIEHAQKLTQESGLAYYDAFALAMNDVLDEECRSLAIPKRITSLVRD
IWLLQLRLSRRQGKRAHKLMEHPKFRAAYDLLALRAEVENNHELQRLTQWWGEFQEATPL
QQKNMLNTLGADPAPRRSRPRRPRKPAPRKEGA
NT seq 1542 nt   +upstreamnt  +downstreamnt
atttttacccgagtagccaatttctgccgtaaggtactgattcgcgatgataaattagct
cgcgatagccaaacagcccgtgatgacacggctcgtgatagcagtgcccgtaaagatata
gtgcaaggtgaagataacgtggcccgcaaagagagaaggcctgccagaacgaatactggc
cgcaaaaatcatgcggagcctgcttcacaacagggctcgatgacaattatcccgcgcgat
cagcacaatatttcccgtaaagatatcagtgataatgcactgaaggttctttatcgcctg
aataaatcaggttatgaagcttatctggttggtggcggcgtccgtgacctgctgctgggc
aaaaaaccgaaagattttgatatcaccaccagcgccacaccagagcaagtgcgaaaatta
ttccgcaactgccgcttggtcggccgccgtttccgtctggcccacgtgatgtttggcccg
gaaatcattgaagttgcaacttttcgtggtcaccacgagcaacaacaggcagaagatagc
gacaaaaactcttcccaacaggcacaaaatggcatgctactgcgtgacaacattttcggc
actattgaagatgatgcccagcgccgtgatttcaccatcaatagcctttattacgggatt
tctgattttgcactgcgggattacaccggcggtttgcgtgatctgaaagagggtgttatc
cgcctgattggttctcctgaaactcgctatcgtgaagatccagtgcggatgctacgcgct
gttcgtttcgccgcgaaactggatatgacgataagcccggaaacggcggagccgatccct
cgtctggcttctttgctacgtgagatcccccccgctcgcctgtttgaagaatcactcaaa
ttgttgcaatcgggctatggctataaaacctatttaaaactgtgtgaatatcagcttttc
cagccgttattcccactcattgcccgtcattttaccgagcatcatgactcgccgatggaa
cgtatgttggtgcaggtactgaaaaatactgaccatcgtctacataatgataagcgcgtc
aatcctgccttcttatttgccgcgatgctttggtatccattgatcgaacatgcgcagaag
ctgacccaagagagtggcttggcatactacgatgctttcgctctggcaatgaatgacgtg
ctggatgaagagtgccgttcactggcgattccaaaacgtattacctcattagtgcgagat
atttggctgctgcaattgcgcctgtcacgtcgccagggtaaacgtgcgcacaaactgatg
gagcatccaaaattccgggctgcttacgacttgctggcactgcgtgccgaagtggaaaat
aaccatgaactacagcgtcttacgcagtggtggggggaattccaagaagcaacgccgcta
caacaaaagaatatgctaaatactttaggggccgatcccgcgccgcgccgctctcgccct
cgccgcccacgcaagccggcaccacgtaaagaaggggcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system