KEGG T03179: LC20

Yersinia enterocolitica LC20: LC20_05114

Entry

LC20_05114        CDS       T03179

Symbol

trmA

Name

(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA

K00557

tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]

Organism

yel Yersinia enterocolitica LC20

Brite

KEGG Orthology (KO) [BR:yel00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:yel03016]
    LC20_05114 (trmA)
Enzymes [BR:yel01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     LC20_05114 (trmA)
Transfer RNA biogenesis [BR:yel03016]
Prokaryotic type
  tRNA modification factors
   Methyltransferases
    LC20_05114 (trmA)

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_25 Methyltransf_4 Cons_hypoth95 MTS Methyltransf_11 Methyltransf_15 Methyltransf_31 PrmA Methyltransf_12 DREV Met_10 Coq4

Other DBs

NCBI-ProteinID:

AHM76365

UniProt:

A0A7U4GIU2

Position

4526491..4527594

AA seq 367 aa
MTPDILPTDSYDHQLAEKSARLQAMMSPFQAPAAEIFRSPAQHYRMRAEFRIWHDGDDLY
HIMFDPQTKLRIRVEQFPVASLLINRLMSALMAAIRAEPILRYKLFQIDYLSTVSGKLIA
SMLYHRQIDEEWQQKARQLRDQLRQQGFDLQLIGRASKTKIMLDHDYIDEVLPVAGREMI
YRQVENSFTQPNAAVNIHMLEWAIDVTQQASGDLLELYCGNGNFSLALARNFERVLATEI
AKPSVAAAQYNIAANHIDNVQIIRMSAEEFTQAMQGVREFNRLKGIDLSSYNCETIFVDP
PRSGLDDETVKLVQAYPRILYISCNPETLCANLEQLQHTHKISRLALFDQFPYTHHMECG
VLLEKRG

NT seq 1104 nt +upstreamnt +downstreamnt
atgacgcccgacatcctgccgacagatagctacgaccaccaattagcggaaaaatctgcc
cgtcttcaggcgatgatgtcgccgtttcaagcccctgccgcggaaatatttcgctcccca
gcacagcattaccgcatgcgggccgagttccgtatttggcacgatggcgatgatctgtac
cacatcatgtttgacccgcagaccaagttgcgaattcgggtcgagcaattcccggtggct
agtttgctaatcaatcgtctgatgagtgccctgatggccgccatcagagctgagcccatc
ttgcgctacaaactgttccaaattgattacttatcgactgtgagcggtaaactgatcgcg
tccatgctatatcaccggcaaatagatgaagaatggcagcaaaaagcgcggcaattacgt
gaccagctgcgccagcaaggttttgatctgcaactcatcggccgggcatcaaaaaccaaa
atcatgctggatcacgactatattgacgaagtgttgccggtcgccgggcgcgagatgatt
tatcgtcaggtcgagaatagtttcacccaacctaatgctgcggtgaatattcatatgctg
gaatgggcgattgacgtcactcaacaggctagcggtgatttattggagctgtactgcggc
aatggcaacttttcgctggcattagcacgtaatttcgagcgggtgctggcgactgaaatt
gccaaaccgtcagtggcagcggcgcaatacaacattgccgccaatcatatcgacaatgtg
caaataatccggatgtctgcagaagaatttactcaggcaatgcagggtgttcgcgagttt
aaccgattgaaaggtattgatttaagcagctataactgcgaaaccatttttgtcgaccca
ccgcgcagcgggttggatgatgaaacggtcaaactggtacaggcttatccgcgtatcctt
tatatctcctgtaatccagaaacactgtgtgccaatctcgagcaactgcaacacacccat
aaaatcagccgattagcgctctttgatcagttcccttacacccatcatatggagtgtggc
gttttactggaaaaacgcggctaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (22)   

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