KEGG T01480: YE105

Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C1772

Entry

YE105_C1772       CDS       T01480

Name

(GenBank) excinuclease ABC subunit C

K03703

excinuclease ABC subunit C

Organism

yep Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)

Pathway

yep03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:yep00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    YE105_C1772
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yep03400]
    YE105_C1772
DNA repair and recombination proteins [BR:yep03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     YE105_C1772

SSDB

Motif

Pfam:

UvrC_RNaseH_dom GIY-YIG UVR HHH_5 HHH HHH_2

Other DBs

NCBI-ProteinID:

ADZ42268

Position

2075674..2077506

AA seq 610 aa
MTDCFDSKEFLKTVTSQPGVYRMYDKAGTVIYVGKAKDLKKRLTSYFRAHVASRKTETLV
KNIAQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPLIFLSADKHPRLAIHRG
AKHEKGEYFGPFPNSYAVRETLALLQKLFPVRQCENSVYRNRSRPCLQYQIGRCSGPCVP
GLVSEEEYQRQVDYVRLFLSGKDQQVLTQLISRMEEASRSLHFEDAARIRDQIQAVRRVT
EQQFVSGDSEDLDVIGVAFDAGLACVHVLFIRQGKVLGSRSYFPKVPAGTELSEVVQTFV
GQFYLQGSQVRTLPGEILLDFTLAEKDLLASSLSELAGRKIQIQSRPRGDRARYLKLART
NASTALVTRLSQQSTIHQRMKELAKILNLDEINRMECFDISHTMGEQTVASCVVFDANGP
VRSEYRRYNISGITPGDDYAAMSQVLKRRYGKALDDKKIPDVIFIDGGKGQLSQAFDVFA
SLNVPWDKQKPLLVGVAKGSDRKAGLETLFLAAEGEGFSLPPDSPALHLIQHIRDDSHNH
AITGHRQRRSKVKNTSALELIEGVGPKRRQILLKYMGGLQPLLNASVEEIAKVPSISQAL
AEKIYNALKH

NT seq 1833 nt +upstreamnt +downstreamnt
gtgactgattgttttgattctaaagagttcttaaaaactgtcaccagccaacctggtgtt
taccgcatgtatgataaggcggggacagttatttatgtcggcaaagcaaaagaccttaag
aagcgtctgacaagctatttccgtgctcatgttgccagtcgaaaaacggaaactttggtt
aaaaatattgcgcaaattgacgtcactgtcacacatacagagacggaagcgctactgctt
gagcataattacatcaagctttatcaacctcgttataatgtactattacgggatgataaa
tcgtatccactcattttcctcagcgcggacaaacatccgcgtctagccattcatcgcggt
gccaagcatgaaaaaggggagtatttcggaccatttcccaattcctacgcagtgcgcgaa
actttagcattactgcaaaaactctttcctgtaaggcaatgtgaaaacagtgtctatcgc
aaccggtcacgaccttgcctacaatatcaaattggccgttgttctgggccatgcgtgcca
ggattagtgagtgaagaggagtatcagcgtcaggtcgattatgttcgtctgttcctatca
ggcaaagaccagcaagtattgacgcaactgatttctcgcatggaagaagcgagccgatcg
cttcactttgaagatgcggcacgtatccgtgatcaaatacaggctgtacggcgagttacg
gaacaacagtttgtttctggcgatagcgaagatctcgatgtgatcggtgtggcgtttgat
gccggattagcctgtgtccatgtgctatttattcggcagggaaaggttctgggaagtcgc
agttatttccccaaagttcctgcgggaacggaattgagtgaagttgttcaaacatttgtc
gggcagttttacctacaaggaagccaggtacgtacgcttccgggtgaaattttgttggat
ttcacgctcgctgaaaaagatctattggcatcttccctttctgaattggctggaagaaaa
atccagatacaaagccgccctcgtggtgatagagctcgttatctcaaacttgcgcgaacc
aatgcgtcaacggcgctggttactcgtttgtcccagcaatcaactatccatcaacgaatg
aaagaattagccaagattcttaaccttgatgagataaatcgtatggaatgttttgatatc
agtcatacgatgggggagcaaactgtcgcatcttgtgtggtttttgatgcaaatggccct
gtacgttcagaatataggcgctacaatattagtggtatcactccgggtgatgattatgct
gctatgtctcaagtgcttaaacgccgatatggtaaggcattagatgataaaaagatcccg
gatgttatttttattgatggcgggaaaggccagttgtcacaagcttttgacgtttttgct
tcactcaatgttccatgggataaacaaaaacctctattagttggtgttgccaaaggaagt
gaccggaaagcaggacttgaaacattgtttctggctgctgagggggaggggttttcattg
ccaccagactcacccgcgttacatctgattcaacatattcgtgacgattctcataatcat
gccataacggggcataggcagcgtcgctcaaaagtaaaaaatactagcgcattagaacta
atagagggtgtgggccccaaacggcggcaaatattgctgaagtatatggggggactgcaa
cctttacttaacgctagcgtcgaggaaattgcaaaagtgccgagtatttcacaagcattg
gcagaaaaaatctacaatgcattgaaacactga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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