KEGG   Yersinia enterocolitica 2516-87: CH48_2553
Entry
CH48_2553         CDS       T03644                                 
Symbol
ffh
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
yet  Yersinia enterocolitica 2516-87
Pathway
yet02024  Quorum sensing
yet03060  Protein export
yet03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:yet00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    CH48_2553 (ffh)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CH48_2553 (ffh)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CH48_2553 (ffh)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yet02044]
    CH48_2553 (ffh)
Enzymes [BR:yet01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     CH48_2553 (ffh)
Secretion system [BR:yet02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   CH48_2553 (ffh)
  Eukaryotic Sec-SRP protein
   CH48_2553 (ffh)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 cobW AAA_31 AAA_24 AAA_30 KTI12 AAA_33 YqeC APS_kinase AAA_14 VirC1 Sigma54_activ_2 Helicase_RecD AAA_16 AAA_19 ArsA_ATPase TsaE ABC_tran DUF5407
Other DBs
NCBI-ProteinID: AJJ25738
Position
2844569..2845930
AA seq 453 aa
MFENLTDRLSRTLRNISGRGRLTEENIKETLREVRMALLEADVALPVVRDFINRVKERAV
GHEVNKSLTPGQEFVKIVKNELIAAMGEVNNELNLAAQPPAVVLMAGLQGAGKTTSVAKL
GKFLKEKQKKKVLVVSADVYRPAAIKQLETLAQAVGVDFFPSDVQEKPIDIVNRALQQAK
LKFYDVLIVDTAGRLHVDEAMMDEIKQVHAAINPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKSDALEPFHPDRVASRILGMGDV
LSLIEDIESKVDRAQAEKLATKLKKGDGFDLNDFLDQLKQMRNMGGMASMLSKMPGAGQL
PDNVKSQMDDKVTVRMEAIINSMTLKERAKPEIIKGSRKRRIATGSGVQVQDVNRLLKQF
DEMQRMMKKMKNGGLAKMMRGMKGMMPPGFPGR
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgtttgagaacttaactgatcgattgtcgcgcacattgcgcaatatcagcggccgtggc
cggctgacagaagaaaatattaaagaaacgctacgtgaagtacgcatggcgttactggaa
gctgacgtagctctgccggttgttcgtgattttattaaccgggtaaaagagcgcgctgtc
gggcatgaggtaaataagagcctcacgccaggccaggaattcgtcaaaatcgttaagaat
gaacttattgccgcgatgggcgaggtcaataacgaactgaatctggcagcacaaccgcca
gcagtggtgttaatggctggcttgcaaggtgcaggtaaaaccaccagtgtggctaaactg
ggtaagttccttaaagaaaaacagaagaaaaaagtgctggttgtttccgctgacgtttat
cgccctgcggcgatcaaacagttggaaaccctggctcaggctgttggcgttgatttcttc
ccgtctgatgtacaggaaaaaccgattgatatcgtcaatcgtgctctacaacaggcgaag
cttaagttttatgatgtcctgattgtcgataccgccggtcgcttgcacgtcgatgaagcg
atgatggacgaaatcaaacaagttcatgccgcgattaatccggttgaaactttgtttgtc
gtggatgccatgaccggtcaggatgcggccaatacagcgaaggcatttaacgaagcgctg
ccgctcaccggtgtcgtgctgaccaaagttgatggtgatgcccgtggcggtgctgcgtta
tctatccgtcatatcaccggtaagccgattaaattcctcggtgtcggtgaaaagtcagat
gcgcttgaacccttccatccagatcgcgtggcttcacgtattctggggatgggcgatgtc
ctgtcgttgattgaagatatcgaaagcaaagttgaccgcgcacaagcggaaaaactggca
actaagctgaaaaaaggcgatggcttcgatctcaatgacttcctggatcaactgaagcaa
atgcgcaatatgggcggtatggccagcatgttgagtaaaatgccaggtgcgggccagttg
ccagataacgtgaaatcgcagatggatgacaaggtgaccgtgcgcatggaggctatcatc
aactcgatgacgctgaaagaacgcgccaagccagaaatcatcaaaggttcacgtaagcgc
cgtattgccactggttctggtgtgcaagtgcaggatgttaaccgcttactcaagcagttc
gacgaaatgcagcgcatgatgaagaaaatgaaaaatggcggtctggccaaaatgatgcgt
ggcatgaaaggtatgatgccaccaggtttcccgggccgctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (24)   
   Pfam (24)   
All databases (35)   

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