KEGG T03643: CH47

Yersinia enterocolitica WA: CH47_230

Entry

CH47_230          CDS       T03643

Symbol

recC

Name

(GenBank) exodeoxyribonuclease V, gamma subunit

K03583

exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]

Organism

yew Yersinia enterocolitica WA

Pathway

yew03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:yew00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CH47_230 (recC)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yew03400]
    CH47_230 (recC)
Enzymes [BR:yew01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     CH47_230 (recC)
DNA repair and recombination proteins [BR:yew03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CH47_230 (recC)

SSDB

Motif

Pfam:

Exonuc_V_gamma RecC_C TTc_toxin_rep

Other DBs

NCBI-ProteinID:

AJI81984

Position

238208..241579

AA seq 1123 aa
MFTVYHSNQLDLLKALTTALIEREPLDNPFQQEVVLVQSPGMAQWLQMQLAQQFSIAANI
EFPLPATFIWEMFTRVLPGIPKESAFSKDAMTWKLMWLLPDLLENPVFSAMKRYLSDDSD
KRKIHQLAARVADLFDQYLVYRPEWLESWERGQLIDNLDDAQQWQALLWVELTRYTRQLE
QPEWHRANLYQRFIRTLLESDVCPTGLPKRVFICGISALPPIYLQALQALGKHIDIHLMF
TNPCRYFWGDIQDYAFLAKLQSRKRRHYRESVEVKLFRDPEQAEQLFNADGEQDLSNPLL
ASWGRLGRDHMYLLSQVDEIQEVHAFVDIEPDNLLHGIQHDMLELEDHAIIGTTPETLAH
SHQKRVLDLRDRSLSMHVCHSPQREVEVLQDNLLRLLEADPELTPRDIIVMVADIDSYTP
YIQATFGNATGDRYLPFAISDRKASQAHPALQAFISLLDLPQSRFTSEQVLALLEVPVLA
NKFGITEDGLRRLRQWVDESGIRWGLDDDNVRELSLPATGQHTWHFGLTRMLLGYAMDSN
AGDWQGVLPYDESSGLAAELAGQLADMLMQLSQWRQQLSESRSLSEWLPLCRQLLDTFFE
PDNDTEAVLVLIEQQWQKVISYGIAAQYPDIVPLNLLRDELASRLDNERISQRFLAGPIN
FCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMAKQVRRGDRSRRDDDRYLFLEAL
LSAQQQLYISYIGRSIQDNSKRYPSVLVSELIEYISQSYHLPGDEELSADDSAKRVIQHL
LCWHARMPFAAENFTQNSELQSYAAEWLPAAESRGAAHPEFNQPLPPEPLPEITLDELIR
FYRHPVRAFFQLRLGVNFVIEETELPDEEPFTLDNLNRYQFNTQLLNALIEESDINTVFT
RARAAGNLPYGSFGELYWESQQEEMLPLAEQICVERKESHSIELNIEFGDTTLTGWMHQI
QEDGLVRWRPAALTAVDGLLLWIEHLVYCAAGGEGESRMYGRKGTAWRYAPLDCNEARQY
LQQLISGYQQGMCEPLLLLSKSGWAWLSQCFDRESGQILWDEEIQTKARMKLLQVWQGDQ
RIAGEGEDNYIQRVFSLMDNQHLDTILHETERYLLPIARHNKA

NT seq 3372 nt +upstreamnt +downstreamnt
atgttcacggtttatcattctaatcaattggatttactcaaagcgctaaccactgcgctg
atagaacgagaaccgttggataacccttttcagcaagaagtggtactggtgcaaagccca
ggtatggcccaatggctacaaatgcaattggctcaacaatttagtattgcagctaatatt
gaatttccattgcctgcgacctttatctgggaaatgtttacccgcgtgttacccggcatc
ccaaaagaaagcgcatttagcaaagatgccatgacatggaaactcatgtggttattgcct
gacctattggagaatccggtattttctgcgatgaaacgctatttaagtgatgatagcgat
aaacgtaaaattcaccaacttgcggcacgcgtcgctgacctttttgaccaatatctggtg
taccgcccagaatggcttgagagttgggaacgtggtcaactcattgataatttggatgat
gcccagcagtggcaagctttactgtgggttgaattaacgcgctatacccgccaattagaa
caaccggaatggcaccgcgccaatctctatcagcgttttattcgcacacttctcgaatcc
gatgtttgtccgacagggctacccaaacgagtattcatctgtggcatatccgctttaccc
ccaatctatttacaggccttacaagcactgggtaaacacatcgatattcatttgatgttt
actaacccgtgccgttatttctggggagacattcaggattatgcttttctggccaagctg
caaagccgtaaacgcagacattatcgtgagtcggtggaagtaaaactgttccgtgaccct
gagcaggcggagcaactatttaatgctgatggtgaacaagatcttagtaacccgttatta
gcctcatgggggcgacttggtcgtgaccacatgtatctgttatcccaagttgatgagatc
caagaggttcatgcttttgtggatatcgaacctgataacctattacatggtattcaacac
gatatgctagagcttgaagatcacgccattattggtactacgccagagacattagcgcat
agccaccaaaaacgagtattagatctcagggatcgctccctaagcatgcacgtctgccac
agccctcagcgcgaagttgaagttttacaagataatctgctgcgattattagaggctgac
cccgaactgactccgcgtgacattattgtcatggtcgctgacattgatagctataccccc
tatattcaggccacatttggtaatgctacaggggatcgctatttgccatttgcgatttca
gaccgcaaggctagccaggcacatcctgcacttcaggcttttatctctctacttgatttg
ccccagagccgttttacttctgagcaggtattagccctgctggaagtgcctgttttagcc
aataaatttggtattaccgaagatggattgcgccgtttacggcaatgggttgatgagtca
ggtatccgctggggattagatgatgacaatgtgcgcgagttgtctctgcccgcaaccggt
cagcatacctggcattttggcctgactagaatgctgctgggttatgctatggacagcaat
gccggtgactggcaaggggttttgccctatgacgaatccagcggtttagcggctgagctt
gccgggcaattagcggatatgttgatgcaattgagccagtggcgacagcaattaagcgaa
tctcgttcactcagtgaatggctaccattatgccgtcaattattagataccttctttgaa
cccgataatgatactgaagcggtgctggttctgattgagcagcaatggcagaaggttatc
agctatggtattgctgcccaatatcctgatattgtgccgctgaatctgttacgggatgaa
ctggcttcgcgtctggacaatgaacgtattagccagcgcttcctcgcagggccaatcaat
ttctgtacactgatgccgatgcgttcaatcccgtttaaagtggtgtgcttattaggaatg
aatgacggtgtttacccacgaacactaccaccgctaggttttgatttgatggctaaacag
gttcggcgcggtgaccgtagccgccgtgatgacgaccgctatctgttcctcgaagcatta
ctctctgcccagcagcagctctatatcagttatatcgggcgctcgattcaagacaacagt
aagcgctatccttcagttctggttagtgagttgattgaatacatttcccaaagttatcac
ttgccaggtgatgaagaactcagtgctgatgatagtgccaagcgggtcattcaacattta
ctctgctggcatgcgcgtatgccgtttgcagcagagaattttacccaaaatagtgagtta
caaagctatgccgctgaatggttacctgctgctgagtccagaggcgcggcgcacccagaa
tttaatcagcctctgccgccagaacccttacctgaaatcactcttgatgaattaatccgc
ttctatcgccaccctgtgagggcttttttccaactccgattgggggtgaatttcgttatt
gaagaaacggaactacctgatgaagaaccctttactttggataacctcaaccgttatcag
tttaatactcaactattgaatgcattgatagaagaaagtgatatcaatactgtcttcacc
cgtgcccgtgcggcgggcaatcttccttatggttcttttggcgagctttactgggaaagt
cagcaagaagaaatgctgccattagctgaacaaatttgtgttgaacgcaaagagagccac
agtattgagctaaatattgagtttggcgataccaccctgactggatggatgcatcaaatt
caggaagatggcttagttcgctggaggccagcggcacttacggcggtcgatgggcttcta
ttatggattgaacatttggtgtattgcgccgcaggcggtgagggtgaaagccggatgtat
gggcgtaaaggaactgcatggcgttatgccccactggattgcaatgaagcacggcaatat
ttacagcagttaatcagtggctatcagcaaggtatgtgcgaacctttactactgctgagt
aaaagcggctgggcatggttgagtcagtgttttgatcgcgagtcggggcaaattttgtgg
gatgaagaaatacaaaccaaagcccgaatgaaacttttacaggtttggcaaggtgaccaa
cggattgccggagagggtgaggataactatatacaaagggtattcagcctgatggataac
caacatctcgacacgatattacatgaaactgaacgttatttattaccaatagctcgccat
aataaggcgtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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