KEGG   Yersinia enterocolitica WA: CH47_4038
Entry
CH47_4038         CDS       T03643                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
yew  Yersinia enterocolitica WA
Pathway
yew02020  Two-component system
yew02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:yew00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CH47_4038 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CH47_4038 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:yew03021]
    CH47_4038 (rpoN)
Transcription machinery [BR:yew03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CH47_4038 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: AJI83927
UniProt: A0A485DFM1
Position
complement(4378142..4379575)
AA seq 477 aa
MKQGLQLKFSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDLHEEIEAKE
TIDSESLDTREALEQKDMPEELPLDATWDEIYTAGTPSGMGNDYSDDELPVYQGETTQTL
QDYLMWQVDLTPFSETDAAIATSIVDAVDETGYLTVPLEDILESMGDENVALDEVEAVLK
RIQHFDPIGVAARNLRECLLVQLSQYDKDTPYLAEARLVISEYLDLLGNHDFRTMIRLSR
LKEDTLKEAIALIQSLDPRPGQSINTGESEYVIPDVLVRKDKGHWTVELNADSIPRLKIN
QQYAAMGSNTRNDSDGQFIRSNLQEAKWLIKSLESRNETLLKVARCIVEQQVAFFENGPE
FMKPMVLADIAQAVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTAI
RALVKKLVAAENPAKPLSDSKLTTLLCEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaactcaagttcagccaacaactggcaatgactccgcagctacag
caggctattcgcctgttgcagctttctacgctagaactccagcaggagattcagttagcg
ctggagagcaaccccctgcttgagcaaactgatcttcatgaagagatagaggcaaaagaa
acaatagacagtgaatcgcttgatacccgcgaagcactggaacagaaagatatgccggaa
gagttgccactggatgctacctgggatgagatttacaccgcaggcacgccgtcgggtatg
ggcaatgattacagcgacgatgaactgccggtctatcagggcgaaaccactcaaacgctg
caagactatttgatgtggcaagtagacttgaccccgttctcagaaactgatgccgccatt
gcaacatcgatcgttgatgcggttgatgaaaccggttatctcactgtgccactggaagac
attctggaaagcatgggggatgaaaacgtcgcattggacgaagttgaagctgtgctcaag
cggatacaacactttgatcctattggtgtagccgcgcgtaacctgcgcgagtgcctattg
gtacagctatcgcaatatgacaaagacaccccctatctcgctgaagcacgcctggtcatt
agcgaatatctggatttgctaggcaaccatgatttccgtacgatgattcgtttaagtcgg
ctaaaagaagatacacttaaagaggccattgccctgattcagtcactggatccgcgccca
ggtcagtctatcaataccggggaatctgagtatgtgattccagatgttctggtacgtaaa
gacaaagggcactggacggtcgagcttaatgccgatagcattccacgcctgaaaatcaac
cagcagtacgcagcgatgggcagcaatacccgtaatgacagtgacgggcagttcattcgt
agcaatttgcaagaagcaaaatggttgataaaaagccttgagagccgtaatgaaacgcta
ttgaaagtggcgcgttgcattgtagagcagcaggtggcgttttttgaaaatgggcctgaa
tttatgaaacccatggtgctggcagacattgcccaagccgtggatatgcatgagtcgaca
atttcccgtgtgaccacgcagaagttcctgcacagtcctcgaggcattttcgaactgaaa
tatttcttctccagtcacgtcaatacagatagcggaggcgaagcttcttctactgcgatt
cgtgcactggtgaaaaaattggttgcggcagaaaatcctgccaaaccacttagtgacagt
aaactgaccacactattatgtgaacaaggcattatggtggctcggcgaaccgtcgcgaag
tatcgagagtcgttatccatcccgccgtcaaaccagcgtaaacagttggtttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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