KEGG   Yersinia frederiksenii: AW19_3800
Entry
AW19_3800         CDS       T03606                                 
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
  KO
K07259  serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Organism
yfr  Yersinia frederiksenii
Pathway
yfr00550  Peptidoglycan biosynthesis
yfr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:yfr00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    AW19_3800 (dacB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:yfr01002]
    AW19_3800 (dacB)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:yfr01011]
    AW19_3800 (dacB)
Enzymes [BR:yfr01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     AW19_3800 (dacB)
Peptidases and inhibitors [BR:yfr01002]
 Serine peptidases
  Family S13: D-Ala-D-Ala peptidase C family
   AW19_3800 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:yfr01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   AW19_3800 (dacB)
SSDB
Motif
Pfam: Peptidase_S13 Beta-lactamase2 Transpeptidase
Other DBs
NCBI-ProteinID: AJI85467
Position
complement(4092642..4094090)
AA seq 482 aa
MHFSRIVSGLACAIAINISISNANAAQVENYTQYLPDGANLALVVQKIGATTPVIDYHAQ
QMALPASTQKVLTALAALLQLGPDFRFNTTLESHATITDGVLRGNLIARFDGDPTLTRQQ
LRNMVTTLRKAGVKQIAGDLIIDTSVFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS
VSLYSAPNPGDMAFIRVASYYPVQMFSEVRTLAKGSPDAQYCELDVVPGELNRFTLTGCL
TQRSEPLPLAFAVQNGASYAGAILKDELKKADIQIDGSLRRQTTPNPAGTLLAQAQSAPL
HDLLKIMLKKSDNMIADTVFRTIGHQRFGVPGTWRAGADAVRQVLRQKAGVDLGNSIVVD
GSGLSRHNLISPATMMQTLQYIAQHDQELNFISMLPLSGYDGTLRYRGGLHEAGVDGKVS
AKTGALQGVYNLAGFITTASGQRMAFVQFLSGYAVPPEDQKNRRAPLVRFESRLYKDIYQ
NN
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgcatttttcacgaattgtcagtggattggcctgtgctattgcaatcaatatcagcata
tctaatgccaatgcggctcaagttgagaattacacacaatatctgcctgatggggcaaat
cttgcgttagtcgtgcaaaaaatcggggccacaaccccggtaatagactatcacgctcag
caaatggcattacctgccagtacgcaaaaggtcctgactgcgctggcggcattgttgcaa
cttggcccagattttcgctttaataccacattagaaagccacgccacaatcacggatggt
gtattacgtggcaatttaattgctcgttttgacggtgatcccaccttaacacgccaacag
ttgcgtaatatggtgacgacactcagaaaagcgggtgtaaaacaaatcgccggtgatttg
attatcgatacgtcggtttttgccagccatgacaaagcccctggttggccgtggaacgac
atgacgcaatgctttagcgccccgccagctgcggcgattgtcgaccggaactgtttttca
gtctccctctatagcgccccgaaccccggcgacatggcgtttatccgagtcgcatcttat
tacccggtgcagatgttcagtgaagtccgcaccttagctaaaggttcgcctgatgcacaa
tattgcgaattagatgtggtgcccggtgagttaaaccggttcacactgacgggctgcctg
acacaacgcagtgagccgctgcccttggccttcgcagtacaaaatggtgccagctatgcc
ggggctattttgaaggatgaattgaagaaagctgatatccaaattgatggcagtttgcgc
cgtcaaactacgccaaatccagcaggcaccctgttagctcaagcgcaatcagcgccgcta
catgacttattgaaaatcatgttgaaaaagtctgacaacatgattgcggacacggtattt
agaactattggtcatcagcggtttggggtgccgggtacatggcgcgctggcgctgatgct
gtacgccaagtattgcgccaaaaagcgggggtagacctcggaaatagtattgtcgtggat
gggtctggcttatcacggcataaccttatttcaccggcaaccatgatgcagacgttgcaa
tatattgctcaacacgatcaagagcttaactttatctcaatgctgccattatcaggctac
gacggcacattacgttatcgtggtgggctacacgaagccggggttgacggcaaggtttca
gcgaaaacaggtgctttgcaaggcgtgtacaatctggccggatttataactaccgccagt
gggcagcgtatggcctttgtacaatttttatctggctacgcggtaccacctgaagaccaa
aaaaatcgtcgggcaccattagttcgtttcgaaagtcgcctgtataaagatatttatcag
aataactaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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