KEGG   Yersinia hibernica: D5F51_03780
Entry
D5F51_03780       CDS       T05961                                 
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
  KO
K03580  ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
yhi  Yersinia hibernica
Brite
KEGG Orthology (KO) [BR:yhi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:yhi03021]
    D5F51_03780 (rapA)
Transcription machinery [BR:yhi03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     D5F51_03780 (rapA)
SSDB
Motif
Pfam: RapA_C Tudor_RapA Tudor_1_RapA SNF2-rel_dom Helicase_C ResIII DEAD AAA_34 AAA_22 Flavi_DEAD
Other DBs
NCBI-ProteinID: QAX77743
UniProt: A0A481QA87
Position
complement(782279..785185)
AA seq 968 aa
MPFTLGQRWISDTESELGLGTVVAIDVRMVTLLFPATGENRLYARNDSPITRVMFNPGDT
ITNHEGWQLKVEEVSEENGLITYIGTRLDTEETGVSMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRFRARKYQSEQFRLPWSGLRGIRASLIPHQLHIAYEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLSGRAERILIVVPESLQHQWLVEMLRRFNLRFSLFDDSRYSEALL
DSTNPFETEQMVICSLDFVRRNKQRLEQLADASWDLLVVDEAHHLAWSEEAPSREYQVIE
QLAEHIPGVLLLTATPEQLGQQSHFARLRLLDPDRFHDYEEFVNEQQKYRPIADAVTLLL
GGEHLADDKLNLLGELINEQDIEPLLKAANSQSEDSEAARQELVTMLMDRHGTSRILFRN
TRNGVKGFPHRVLHQIKLSLPTQYQTAIKVSGIMGAKKPLEARAKDMLYPEQIYQEFEGE
NATWWNFDPRVEWLLNYLIANRNEKVLVICAQAATALQLEQVLREREAIRAAVFHEGLSL
IERDRAAAYFASEEDGAQVLLCSEIGSEGRNFQFACQLVMFDLPFNPDLLEQRIGRLDRI
GQNREIQIMVPYLENTAQAILVRWYHEGLDAFEHTCPTGRTIYDSGYQELITYLATPNEQ
EGLDEFIHTCRQQHEGLKLQLEQGRDRLLEMHSNGGEHGQELAQIIADQDNDVNLVSFAL
NLFDIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPQDGCTVTFDREQALSREDAQFVSWE
HPIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKHLQLTRFLPPTP
VRMLMDRNGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQQEVHTMLQQAEALVEGQAR
ILIESAKHEADDKLSAELARLEALKAVNPNIRDDEIEALEHNRKMVLENLNQAGWRLDAI
RLVVVTHQ
NT seq 2907 nt   +upstreamnt  +downstreamnt
atgccttttacacttggtcaacgctggatcagcgacacagaaagcgaacttggattgggt
actgtcgttgccattgacgtacgcatggtcaccttactgtttcccgcaaccggtgaaaac
cgcctttacgccagaaatgactcgcccatcacccgcgtcatgttcaatccgggtgatacc
atcactaaccacgaaggctggcagctgaaagtggaagaggtatctgaggaaaatgggctg
attacctatatcggcacccgcctagataccgaagaaaccggcgtttccatgcgtgaagtt
ttgctcgatagcaaactgacttttagcaagccgcaagacagactatttgccggccaaatc
gatcgtatggatcgtttcgccctacgtttccgcgcccgtaaataccaaagcgagcagttc
cgtctgccctggagtggcttgcgcggtatccgtgccagtttgatcccacaccaattacat
atcgcttatgaagtgggccagcgccatgcaccgcgcgtattactggccgatgaagtggga
ttgggtaaaaccatcgaagctggcatgattatccaccagcagctgctgtctggccgggct
gagcgcatcctcatcgtagtaccggaaagtctgcaacatcagtggctggtcgaaatgctg
cgccgcttcaatctgcgcttctcgctgtttgatgacagccgctattccgaagcgctactc
gacagcaccaatccatttgaaaccgaacagatggtgatttgctcactggatttcgtacgt
cgcaataagcagcgcctggaacaattggcggatgcatcttgggatctgctggtagtggat
gaagctcaccatctggcctggagcgaagaggccccgagccgcgaatatcaagttattgag
caactggccgaacatattcccggcgtattgctattgaccgcaacccccgagcaactgggc
cagcaaagtcactttgcccgcttgcgcctactggatcccgaccgcttccacgattacgaa
gagtttgttaatgagcagcaaaaatatcgtccaatcgccgatgcagtcaccttgctgttg
ggcggtgagcacttagctgacgacaaactgaacctgttgggcgagctcattaatgagcag
gatattgagccgctgctgaaagcagccaacagccaaagtgaagatagcgaagctgcgcgt
caagaactggtcacaatgctgatggacaggcatggcaccagccgtattttgttccgcaat
acacgtaatggcgtaaaaggtttcccgcaccgtgttttgcatcagattaagctgtcatta
ccgacgcaatatcagacagcgattaaagtatccggcattatgggggccaagaaacccctg
gaagcgcgcgccaaagacatgctttacccggagcaaatctatcaagaatttgagggtgaa
aatgccacgtggtggaactttgacccgcgcgttgaatggctgcttaactacctgattgct
aaccgcaacgaaaaagtgctggttatctgcgcgcaagccgccaccgcattgcagctcgaa
caagtattgcgcgagcgagaagctatccgtgccgccgtgttccatgaaggtttatcgctg
attgaacgtgaccgcgcagcggcctattttgcatctgaagaagatggcgcacaggtgcta
ttgtgttcagaaatcggctctgaggggcgtaacttccaatttgcttgccagttggtaatg
tttgatttgccctttaacccagacttgcttgaacagcgtattggccgcttggaccgtatt
ggccaaaaccgtgaaatccaaatcatggtgccttatctggaaaataccgcgcaggccata
ctggtgcgttggtatcacgaaggtttggatgcttttgaacatacctgcccaaccggtcgc
accatttatgacagtggctatcaggaattaattacctatctggcgacgccgaatgaacag
gaagggttggatgaatttatccacacctgccgccagcagcatgaggggttaaaactccaa
ttagaacagggccgtgaccgcctgctagagatgcactccaatggcggtgagcatgggcaa
gaactggcgcaaatcattgctgaccaagacaatgatgtgaatttagtcagtttcgccctg
aatctgttcgatatcgtggggattaaccaagaagaccgcagcgataatttgattgtgctg
acgccatctgaccatatgctagtacccgatttccctgggctgccgcaggatggttgcaca
gtcacatttgatcgcgaacaagccttatcgcgcgaagatgcccagtttgtcagttgggag
caccccattatccgtaacggtctggaccttatcttgtcaggcgacaccggtagctgcgca
gtttctctgttaaaaaacaaagcattaccggtgggcactctgcttgctgagctggtctat
gtggttgaagcacaggcgccgaagcacctgcaactgactcgttttttacccccgacaccg
gtgcggatgctgatggacagaaatggcaccaatttggcggcgcaggttgaatttgaaagt
tttaatcgccaactgaatgccgtcaatcgccacacctccagcaaactggtcaatgcagtg
cagcaagaagttcataccatgctacaacaagcagaagcattggttgagggacaagcgcgt
atattgattgaatcagccaagcatgaagcggacgataaactgagtgctgaactggcacgt
ctggaagcactgaaagcggttaatcccaatattcgtgatgacgaaatagaggctctggaa
cataaccgtaaaatggtgctggaaaacctgaatcaggccggctggcgtttggatgctatc
cgtctggtcgtggtaacacaccagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system