KEGG   Yersinia intermedia: CH53_1364
Entry
CH53_1364         CDS       T03608                                 
Symbol
groL
Name
(GenBank) chaperonin GroL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
yin  Yersinia intermedia
Pathway
yin03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:yin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CH53_1364 (groL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:yin03019]
    CH53_1364 (groL)
   03110 Chaperones and folding catalysts [BR:yin03110]
    CH53_1364 (groL)
   03029 Mitochondrial biogenesis [BR:yin03029]
    CH53_1364 (groL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:yin04147]
    CH53_1364 (groL)
Enzymes [BR:yin01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     CH53_1364 (groL)
Messenger RNA biogenesis [BR:yin03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CH53_1364 (groL)
Chaperones and folding catalysts [BR:yin03110]
 Heat shock proteins
  HSP60 / Chaperonin
   CH53_1364 (groL)
Mitochondrial biogenesis [BR:yin03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    CH53_1364 (groL)
Exosome [BR:yin04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CH53_1364 (groL)
  Exosomal proteins of other body fluids (saliva and urine)
   CH53_1364 (groL)
  Exosomal proteins of breast cancer cells
   CH53_1364 (groL)
  Exosomal proteins of colorectal cancer cells
   CH53_1364 (groL)
  Exosomal proteins of bladder cancer cells
   CH53_1364 (groL)
SSDB
Motif
Pfam: Cpn60_TCP1 MukE
Other DBs
NCBI-ProteinID: AJJ20789
UniProt: A0A0T9M0T8
Position
complement(1551793..1553445)
AA seq 550 aa
MAAKDVKFGNDARIKMLRGVNILADAVKVTLGPKGRNVVLDKSFGSPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKKLSVPCSDSKAIAQVGTISANSDSTVGELIAQAMEKVGKEGVITVEEG
SGLQDELDVVEGMQFDRGYLSPYFINKPETGSIELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTSGTV
ISEEIGLELEKTTLEDLGQAKRVVINKDTTIIIDGVGDEAAIQGRVTQIRQQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RAASAITKSGLKGDNEDQNVGIKVALRAMESPLRQIVVNAGEEASVIANNVKAGSGSYGY
NAYTEEYGDMIAMGILDPTKVTRSALQYAASIAGLMITTECMITDLPRDDKGGDMGAGGM
GGMGGMGGMM
NT seq 1653 nt   +upstreamnt  +downstreamnt
atggcagctaaagacgtaaaattcggtaacgacgcacgcatcaaaatgctacgcggcgta
aacatccttgctgatgcagtgaaagtgaccctgggcccgaaaggccgtaacgtagttctg
gacaagtctttcggctctccaactatcaccaaagatggtgtttcagttgcgcgtgagatc
gaactggaagacaagtttgagaacatgggtgcacagatggttaaagaagttgcctctaaa
gcgaatgacgcggcgggtgacggtaccactactgcaacagtattggctcaatccattatc
actgaaggcctgaaagcagttgcggccggcatgaacccaatggatctgaagcgcggtatc
gacaaagcagttatcgctgcggttgaagagctgaaaaaactgtctgtaccttgctctgac
tctaaagctatcgctcaggtagggactatctctgccaactctgactccaccgtaggtgag
cttatcgctcaagcgatggaaaaagtcggtaaagaaggcgttatcaccgttgaagaaggt
tcaggcctgcaagacgagctggacgtagtagaaggtatgcagttcgaccgtggctacctg
tctccttacttcatcaataaaccagaaactggttctattgaacttgaaagcccattcatc
ctgctggctgacaagaaaatctctaacatccgtgaaatgctgccagtgctggaagccgta
gcgaaagccggtaaaccactgctgatcatcgcagaagacgttgaaggcgaagccctggcg
actctggtggttaacaccatgcgcggtattgttaaagttgcagcggttaaagcaccaggc
ttcggcgaccgtcgtaaagctatgctgcaagacatcgcgacactgactagcggtactgtt
atctctgaagagatcggtctggaactggaaaaaaccactctggaagatctgggtcaggca
aaacgcgttgttatcaataaagacaccactatcatcatcgatggcgtaggcgatgaagcg
gcaatccagggtcgtgttactcagatccgtcagcaaattgaagatgcgacttctgactac
gacaaagaaaaactgcaagagcgtgtcgctaaactggctggcggcgttgccgttatcaaa
gtgggtgccgcaactgaagttgaaatgaaagagaagaaagcgcgcgttgaagatgctctg
cacgcaacccgtgcggcagtagaagaaggcgtagtggctggtggtggtgttgcactgatt
cgtgctgcatctgctatcactaaatctggtctgaaaggcgataacgaagatcagaacgtc
ggtatcaaagttgctctgcgtgcgatggaatctccactgcgtcagatcgtggttaacgcc
ggtgaagaagcctctgttatcgcgaacaacgttaaagcgggttcaggtagctacggctac
aacgcttataccgaagaatacggcgacatgatcgcgatgggtatcttggatccaactaaa
gtgactcgttctgctctgcagtacgcagcctctattgctggtctgatgatcaccaccgag
tgcatgatcactgacctgccacgtgatgacaaaggcggtgatatgggcgctggcggcatg
ggtggtatgggcggcatgggcggcatgatgtaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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