KEGG   Yersinia intermedia: CH53_1976
Entry
CH53_1976         CDS       T03608                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
yin  Yersinia intermedia
Pathway
yin00521  Streptomycin biosynthesis
yin00523  Polyketide sugar unit biosynthesis
yin00525  Acarbose and validamycin biosynthesis
yin00541  O-Antigen nucleotide sugar biosynthesis
yin01100  Metabolic pathways
yin01110  Biosynthesis of secondary metabolites
yin01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:yin00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    CH53_1976 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    CH53_1976 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    CH53_1976 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    CH53_1976 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    CH53_1976 (rfbB)
Enzymes [BR:yin01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     CH53_1976 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 3Beta_HSD RmlD_sub_bind NAD_binding_4 adh_short Sacchrp_dh_NADP KR
Other DBs
NCBI-ProteinID: AJJ17442
UniProt: A0A0T9MHW5
Position
2237592..2238659
AA seq 355 aa
MRRILVTGGAGFIGSAVVRHIIDGTSDSVVVVDKLTYAGNLESLAVVAHSERYAFEQVDI
CDRAELDRVFAHYQPDMVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQQLS
AEAKQAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL
PTLVTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGNGAQVRDWLYVEDHARALYQVV
TEGVVGETYNIGGHNERKNIEVVETLCTLLDELVPAKPAGIEHYRDLITYVKDRPGHDMR
YAIDAGKIERELGWRPQETFESGIRKTLLWYLNNESWWRRVQDGSYAGERLGLSD
NT seq 1068 nt   +upstreamnt  +downstreamnt
ttgagacgtattctagtcacaggcggggccggttttatcggctctgcggtggtaagacat
attatcgatggcacttcagacagcgtagtggtggtggataagctcacctatgccggtaat
ctggagtcactggctgttgtcgcccacagcgaacgttatgcgtttgagcaggtggatatc
tgtgatcgcgctgaactggatcgggtttttgcgcactatcagccggatatggtgatgcat
ctggcggcagaaagtcatgtggatcgctctattgatgggccagcggcttttatcgaaact
aacgtggtgggtacatacaccctgttagaggcggcgcgtcattactggcaacaactgagt
gctgaggcgaagcaggcgtttcgcttccaccatatctcgaccgatgaggtatatggcgat
ctgcacggtactgatgatctgtttaccgaaaccacaccttatgcgccaagcagcccctat
tcagcgtctaaggcgtccagtgaccatttagttcgtgcctggttgcggacttatggttta
ccaacgctggtaactaattgctcaaataactatgggccatatcatttccctgagaagttg
ataccgctggttattctgaatgcgctggcgggtaaaccgttaccggtgtatggcaatggc
gcacaggtacgcgactggttgtatgtcgaagaccacgcgcgggccttgtatcaggtggtt
accgaaggtgtcgtgggtgagacatacaatattggcggccataatgagcgcaaaaatatt
gaagtggttgaaaccctttgtacacttttggatgaacttgtcccagccaaaccggccggc
attgagcattaccgtgacctgatcacctatgtcaaagatcgtccagggcatgatatgcgc
tatgccattgatgctggcaagattgagcgtgaattaggctggcggccacaggaaaccttc
gaaagtggcatccgcaaaaccctgttgtggtatttgaataatgaatcgtggtggcgtcgt
gttcaggatggttcttacgccggtgagcgtttgggtttaagcgactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (29)   

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