KEGG   Yersinia intermedia: CH53_3819
Entry
CH53_3819         CDS       T03608                                 
Name
(GenBank) AMP-binding enzyme family protein
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
yin  Yersinia intermedia
Pathway
yin00061  Fatty acid biosynthesis
yin00071  Fatty acid degradation
yin01100  Metabolic pathways
yin01212  Fatty acid metabolism
yin02024  Quorum sensing
Module
yin_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:yin00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    CH53_3819
   00071 Fatty acid degradation
    CH53_3819
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CH53_3819
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:yin01004]
    CH53_3819
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:yin04147]
    CH53_3819
Enzymes [BR:yin01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     CH53_3819
Lipid biosynthesis proteins [BR:yin01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   CH53_3819
Exosome [BR:yin04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   CH53_3819
  Exosomal proteins of breast cancer cells
   CH53_3819
SSDB
Motif
Pfam: AMP-binding AMP-binding_C DUF4235
Other DBs
NCBI-ProteinID: AJJ18918
Position
4235397..4237091
AA seq 564 aa
MEKVWLKRYPADVPAEIDPDRYSSLVEMFENAALRYADQPAFINMGEVMTFRKLEERSRA
FAAYLQQGLGLQKGDRVALMMPNLLQYPIALFGVLRAGMVVVNVNPLYTPRELEHQLNDS
GAVAIVIVSNFAHTLEKIVFKTQIKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYYL
PDAISFRTALQKGRRMQYVKPDVINTDLAFLQYTGGTTGVAKGAMLTHRNMQSNLEQAKA
AYAPLLQPGHELVVTALPLYHIFALTMNCLLFIELGGRSLLITNPRDIPGMVKELSRYPF
TAMTGVNTLFNALLNNEEFTKLDFSTLRLSVGGGMPVQKAVAERWEKLTGKHLLEGYGLT
ECSPLVTGNPYDLKHYSGSIGLPVPSTDVRLINDEGNEVGLGEPGELWVRGPQVMLGYWQ
RPDATDEVLKDGWLATGDIATLDEQGFLRIVDRKKDMILVSGFNVYPNEIEDVVALHSKV
LESAAVGVPNEVSGETVKLFVVKKDASLTPEELLTHCRRYLTGYKVPKIVEFRDELPKSN
VGKILRRELRDEQVKANGSEQSAA
NT seq 1695 nt   +upstreamnt  +downstreamnt
ttggaaaaagtatggttaaagcgctatccggcggatgtccccgcagagattgatccggac
cgctattcttctttggtggaaatgtttgagaatgccgcactgcgttatgcggaccaacct
gcattcatcaatatgggggaggtgatgactttccgtaagttggaagagcgcagtcgtgct
ttcgccgcctatttacagcaaggcttagggttgcaaaaaggcgaccgtgtcgcattgatg
atgcccaatctactgcaatatcctatagcattgtttggcgttttgcgtgcaggtatggtg
gtggtgaatgttaacccgctgtataccccgcgcgagctggagcatcaactgaatgacagt
ggggctgtggcaattgtcattgtctcgaatttcgctcacacactggaaaagatcgttttt
aaaacccagatcaagcatgtcatcttaacgcgtatgggtgaccagctatcgacggctaaa
gggacgctggttaatttcgtggtgaaatacatcaaacgactggtaccaaaatattatcta
cctgatgctatttcgttccgtaccgcgctgcaaaaaggccgtcgcatgcagtatgttaag
ccagatgttatcaatactgacctggcatttttgcaatataccggtggtactactggtgta
gcgaaaggcgcaatgctgacacaccgcaatatgcagtcgaacctggaacaggcgaaagcg
gcttatgcgcctttgctgcaacctggtcacgaactagtggtcacggcgttacccctttat
cacatatttgccttaaccatgaactgcctactgttcattgagttaggtgggcgcagctta
ttgataaccaatccgcgtgatatcccagggatggtaaaagagctaagtcgctacccattc
acggcaatgacgggagtgaataccttatttaacgccttgttaaataatgaagaatttacc
aagttggatttctctacattgcgcctttctgttggtggcggcatgccagtgcagaaagcg
gttgctgagcgctgggaaaaactgaccgggaaacatctgttggaaggctatggtttgacc
gagtgctcgccgctagtgactggcaacccttatgatttgaaacactacagtggcagcatt
ggcctgcctgtaccctctaccgatgttcggttgataaatgatgaggggaacgaagtggga
ttaggcgagccgggcgaactatgggtgcgtgggccacaagttatgttaggctattggcag
cgaccagacgcgacggatgaagtgttaaaagacggttggctggcaacaggcgacatcgcg
acgcttgatgagcaaggttttttgcgcatcgttgatcgcaaaaaggatatgattctggtt
tctggttttaacgtttaccccaatgagatcgaagatgtggtagcgttacattcgaaagtg
ctggagtctgctgcggttggcgtgcctaatgaggtctctggtgagacggtaaaactgttt
gtcgtgaaaaaagatgcctcactgacacccgaagagctgctaacccattgccgacgctac
cttacagggtataaagtaccgaaaatagtagagttccgtgacgagttgccgaaatcaaat
gtcggcaaaattttgcgtagggaactgcgtgacgagcaagttaaggctaacggtagcgaa
caaagcgccgcctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

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