KEGG   Yersinia intermedia: CH53_3855
Entry
CH53_3855         CDS       T03608                                 
Symbol
topB
Name
(GenBank) DNA topoisomerase 3
  KO
K03169  DNA topoisomerase III [EC:5.6.2.1]
Organism
yin  Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:yin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:yin03032]
    CH53_3855 (topB)
Enzymes [BR:yin01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     CH53_3855 (topB)
DNA replication proteins [BR:yin03032]
 Prokaryotic type
  DNA Topoisomerases
   CH53_3855 (topB)
SSDB
Motif
Pfam: Topoisom_bac Toprim FYRC Toprim_4
Other DBs
NCBI-ProteinID: AJJ20071
Position
4280299..4282224
AA seq 641 aa
MRLFIAEKPSLARAIADILPKPHRRGDGFIACGSDQMVTWCVGHLLEQAQPDAYDSRYAR
WSLADLPIIPEKWQLQPRPSVSKQLNIIKQLLQQADEVVHAGDPDREGQLLVDEVLDYLD
LVAEKRQNVRRCLINDLNPQAVERAVERLRYNREFIPLCVSALARARADWLYGINMTRAY
TILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIEDFIPKDFFEVKAHIVTPADERFIALW
QPSDSCESYQDEEGRLLHRPLAEHVVNRITGQPAFVTSYNDKRESETAPLPFSLSTLQIE
AAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLNAISIHQADLLP
LEVMDSDRRNRCWDDKKVDAHHAIIPTARASKVNLTTDESKVFRLVAQQYLMQFCPDAQF
RKCVIELDIAGGKFVAKARFLAEAGWRTLLGSKERDEENEGAPLPVVEKGAELLCERGEV
VERQTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTEATRAGIIELLFKRTF
LFKKGRYIHASPAGRALIHALPDIAARPDMTAHWESTLTQISEKNCRYQDFMQPLVATLQ
HLISQAKQNRSPQVFRGLPAAPSGAIKKRKKAPSKAKENKS
NT seq 1926 nt   +upstreamnt  +downstreamnt
atgcgactttttattgctgaaaaacccagtttggcgcgggcgattgccgatattctgcca
aagccgcatcgtcgaggcgatggatttattgcctgtggtagtgaccaaatggtgacatgg
tgtgttggtcacttgctggaacaggcccaacctgatgcttatgacagccgctatgcacgc
tggtcgttagctgatttacccattattcctgaaaaatggcagctacagcctcggccctca
gtcagtaagcaattgaatattatcaaacaacttttgcaacaggccgacgaagtggttcat
gcaggtgacccggatcgcgaagggcaacttttggttgatgaggtattggattacctcgat
ttggtggcagagaagcggcaaaatgtccgccgttgcctgattaacgatctcaatccgcag
gcagtggaacgtgcggtggagcgtttgcgttataaccgcgaatttatcccgttatgtgtt
tcggcattggcacgcgccagagcagactggttatatggcatcaatatgactcgtgcctat
actattcttgggcgcaatgcaggttatgatggcgttttgtcagtagggcgggtgcaaacg
ccagtattaggtttggttgttcgccgtgacgaagaaattgaagattttattcccaaagac
tttttcgaagtcaaagcccatattgtcacacctgcggatgagcgttttattgccctatgg
cagccgagtgattcttgcgagtcgtatcaggatgaagaagggcgcttgttgcatcggcca
ctggctgaacatgtggttaatcgcatcaccggtcagcctgcatttgtaacttcctataat
gataaacgggaatcagaaaccgcaccgttacccttttccctttcaacattgcagattgaa
gccgccaaacgctttggtttgagcgcccagcaagtgctggatatttgtcagcgtttatat
gaaacgcacaaattaattacgtatccgcgttcagattgccgatacctaccagaagagcat
ttcgctgggcgtcattcggtcttaaatgccattagtatccatcaggctgacttattgccg
ttagaggtaatggatagcgatcggcgtaatcgctgctgggatgacaaaaaagtcgatgcc
catcacgcgattatcccaacagcgcgggccagtaaggtgaatctaaccactgatgagagc
aaggttttccgattggtagcacagcaatatctgatgcaattttgcccagacgcacaattt
cgtaaatgcgtcattgaactcgatattgctggtgggaagtttgttgctaaagcccgtttt
ctggcggaggctggctggcgtaccttgcttggcagcaaagagcgcgatgaagaaaacgaa
ggcgcacctttgccagtggtggaaaaaggtgctgaattattatgtgagcggggtgaggtt
gttgaacgtcaaacccagccgccaaggccatttaccgatgccagtttgttgtctgctatg
accgggatcgcgcgatttgtgcaggacaaagagctgaaaaaggtgttacgcgcaacggat
ggtctgggtactgaggccacgcgcgccgggattattgaactgcttttcaaacgtactttt
ttattcaaaaaagggcgttatattcacgcaagcccagcgggaagagcattgattcacgcg
ctgcctgatattgcagcacggccagatatgactgcacattgggaatcgacactgacacaa
atcagtgagaaaaattgccgatatcaggatttcatgcagccactggtggcaacattgcaa
catttaatcagtcaggcaaaacaaaatcgctcacctcaggtatttcgtgggttgccagcg
gcaccgtctggggcgataaagaaacgtaaaaaagcaccatctaaagccaaggagaataag
tcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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