KEGG T03608: CH53

Yersinia intermedia: CH53_412

Entry

CH53_412          CDS       T03608

Symbol

truA

Name

(GenBank) tRNA pseudouridine(38-40) synthase

K06173

tRNA pseudouridine38-40 synthase [EC:5.4.99.12]

Organism

yin Yersinia intermedia

Brite

KEGG Orthology (KO) [BR:yin00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:yin03016]
    CH53_412 (truA)
Enzymes [BR:yin01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     CH53_412 (truA)
Transfer RNA biogenesis [BR:yin03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    CH53_412 (truA)
Prokaryotic type
    CH53_412 (truA)

SSDB

Motif

Pfam:

PseudoU_synth_1

Other DBs

NCBI-ProteinID:

AJJ20473

Position

complement(488453..489295)

AA seq 280 aa
MSELELAQQQDVVAETASIKIALGIEYNGSRYFGWQRQLEVASVQACLEAALSKVANEPI
GVFCAGRTDAGVHATGQVVHFVTTAVRKDAAWTMGVNSHLPSDIAVRWIKTVDDDFHARF
SATARRYRYIIFNHRYRPAVLAQGVTHCYLPLDAEKMEHAAQCLLGENDFTSFRAIQCQS
RTPWRNVKHVKVTRHGAYIVVDIKANAFVHHMVRNIVGSLIEIGCGNQDVNWMAELLALK
DRSRAAATAKAEGLYLVSVDYPERFALPIAPMGPLFLADD

NT seq 843 nt +upstreamnt +downstreamnt
atgtccgaacttgagttggctcagcaacaagacgtcgtggctgaaacggccagtataaaa
attgcgctgggtattgaatataatggcagccgctattttggttggcaacggcagttagag
gttgccagtgtgcaggcttgcctggaggccgctttatcgaaagtagccaatgaacccatc
ggtgtattttgtgctgggcgcactgatgctggcgtacatgccaccgggcaggtggtgcat
tttgtcaccacggcggtgcgtaaagatgccgcctggactatgggggttaatagtcattta
ccttcagatatcgccgtgcgttggataaaaacagtggatgatgattttcatgcccgtttc
agcgcaaccgcccgccgttatcgctatattatttttaaccatcgctatcgcccggcggtt
ttggcgcaaggggtaacccattgctacctgccgctggatgcggaaaaaatggaacacgct
gcgcaatgtttactcggcgagaatgattttacctcatttcgcgcgatacagtgccagtct
cgtacgccatggcgaaatgtaaaacatgtcaaagttacccgacatggcgcgtatatcgtg
gtagatatcaaggccaacgcttttgtccatcatatggtgcgtaatattgttggtagcctg
attgagattgggtgtggtaatcaggatgtcaactggatggccgagttgctggcactgaaa
gaccgatcacgtgctgcggcaacggcgaaagccgaggggttgtatttagtctctgttgat
tatcctgaacgctttgctctaccaatagcgccaatggggccactctttttggcagatgac
tga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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