KEGG   Yersinia rochesterensis: CH54_2630
Entry
CH54_2630         CDS       T03609                                 
Name
(GenBank) exonuclease family protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ykr  Yersinia rochesterensis
Pathway
ykr03030  DNA replication
ykr03430  Mismatch repair
ykr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ykr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CH54_2630
   03430 Mismatch repair
    CH54_2630
   03440 Homologous recombination
    CH54_2630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ykr03032]
    CH54_2630
   03400 DNA repair and recombination proteins [BR:ykr03400]
    CH54_2630
Enzymes [BR:ykr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CH54_2630
DNA replication proteins [BR:ykr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CH54_2630
DNA repair and recombination proteins [BR:ykr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CH54_2630
SSDB
Motif
Pfam: RNase_T Rv2179c-like RhoGEF67_u2
Other DBs
NCBI-ProteinID: AJJ34893
Position
complement(2855368..2856012)
AA seq 214 aa
MNSNNPLSRLACAFRRSIVKAGKTLCKLNAKQRAQRWLKNNYLILDTETTGLGDDAEIIE
ISIIDCTGKILLDTLVKPLKSIPAAATAIHGITNEMVANAPTWKDIHHQFVALSNDRTLL
IYNASFDSRLIFQTAAANNCPVPEKKYIFDAECVMKTYAEYYGQWDQKRNKFKWQRLSNA
AEQQGVAIDGTPHRALADCKTTLGVIQAIAGVRS
NT seq 645 nt   +upstreamnt  +downstreamnt
ttgaattctaataacccactatctaggctagcgtgtgcttttaggcggtctattgttaaa
gccggaaaaacactctgcaaattaaacgccaaacaacgcgctcaaagatggctaaaaaat
aactatcttattttagacacagaaacaacgggccttggtgacgatgctgaaataattgaa
atcagtatcattgattgtaccggtaagatattgctggatacgctggttaaaccattaaaa
tccattcccgcagcggcaaccgccattcatggaatcactaatgaaatggtagcgaacgcg
ccaacatggaaagatattcatcatcaatttgtggcactaagcaatgaccgcaccttgctt
atttataatgcctcttttgattcccgcttaatttttcaaacagcagcggctaataattgc
ccggtgccagagaagaaatatatttttgatgctgagtgcgtcatgaaaacctatgcggaa
tattacggccagtgggatcagaagcgaaataaatttaaatggcaaagactgagcaatgca
gccgaacaacagggcgttgccattgatggtacgccgcaccgcgcacttgccgattgtaaa
acaacgctaggtgttatccaggctatagcaggggtgagatcatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system