KEGG   Yersinia rochesterensis: CH54_2940
Entry
CH54_2940         CDS       T03609                                 
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding family protein
  KO
K03111  single-strand DNA-binding protein
Organism
ykr  Yersinia rochesterensis
Pathway
ykr03030  DNA replication
ykr03430  Mismatch repair
ykr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ykr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CH54_2940 (ssb)
   03430 Mismatch repair
    CH54_2940 (ssb)
   03440 Homologous recombination
    CH54_2940 (ssb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ykr03032]
    CH54_2940 (ssb)
   03400 DNA repair and recombination proteins [BR:ykr03400]
    CH54_2940 (ssb)
   03029 Mitochondrial biogenesis [BR:ykr03029]
    CH54_2940 (ssb)
DNA replication proteins [BR:ykr03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CH54_2940 (ssb)
DNA repair and recombination proteins [BR:ykr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     CH54_2940 (ssb)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    CH54_2940 (ssb)
Mitochondrial biogenesis [BR:ykr03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    CH54_2940 (ssb)
SSDB
Motif
Pfam: SSB
Other DBs
NCBI-ProteinID: AJJ35594
Position
3196873..3197421
AA seq 182 aa
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTEWHRVVL
FGKLAEVAGEYLRKGSQVYIEGALQTRKWTDQAGVEKYTTEVVVNVGGTMQMLGGRQGGG
APAGGGAPQEGGAQGGWGQPQQPQGGNQFSGGQTSRPAQPAPAAQPQGGNEPPMDFDDDI
PF
NT seq 549 nt   +upstreamnt  +downstreamnt
atggccagcagaggcgtaaacaaagtgattttggtcgggaatttgggccaagacccggaa
gtccgctacatgccgaacggcggcgctgttgccaatatcaccctggcgacttccgaaagc
tggcgtgataaagccactggcgagcagaaagaaaagacggaatggcaccgtgtagtgttg
ttcggcaagctggcagaagtcgcgggtgaatatctgcgcaaaggctctcaggtctatatt
gagggtgctctacagacccgtaagtggacagatcaggctggtgttgagaaatacaccaca
gaagttgtggttaacgtgggtggcaccatgcaaatgctgggtggccgtcaaggcggtggt
gctccagcgggtggtggcgcaccacaagagggtggtgcacaaggcggttggggtcaacct
cagcagccacaaggtggcaatcagttcagtggcggccagacttcgcgcccagctcagcct
gctccagcagcacaaccacaaggcggcaatgagccaccaatggattttgacgacgatatt
ccgttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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