KEGG   Yersinia rochesterensis: CH54_3423
Entry
CH54_3423         CDS       T03609                                 
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
ykr  Yersinia rochesterensis
Pathway
ykr00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ykr00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CH54_3423 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ykr01007]
    CH54_3423 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ykr03016]
    CH54_3423 (lysS)
Enzymes [BR:ykr01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     CH54_3423 (lysS)
Amino acid related enzymes [BR:ykr01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   CH54_3423 (lysS)
Transfer RNA biogenesis [BR:ykr03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    CH54_3423 (lysS)
 Prokaryotic type
   Other AARSs
    CH54_3423 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: AJJ36765
UniProt: A0A0T9PUJ2
Position
3735376..3736893
AA seq 505 aa
MSEQKPQVAEQAQELNSELQARREKLAALREKGIAFPNDFRREHLSDQLHAEYGSKENEE
LEALNIEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYNEEFKKWDLGD
ILGARGKLFKTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDES
RNTFKVRSQVMAGIRSFMVEKGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRT
LTENVLGSSVVQYGEQTFDFGKPFAKLTMKEAICKYRPETNVADLDDMDKAVAIAESLGI
KVEKSWGLGRVQCEIFEETAESHLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGG
REIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPVK
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgtcagagcaaaaaccacaagtcgctgagcaagcgcaagaactcaatagtgagttacaa
gctcgtcgggaaaaactggctgcactgcgggagaagggaattgctttccctaatgatttc
cgccgtgagcatctctctgaccagctacatgctgagtacggcagcaaagagaatgaagaa
ttagaagcgctgaatatagaagtcactgttgctggccgtatgatgactcgccgtattatg
gggaaagcatcatttgtgacgctgcaagatgtcggtggccgtattcaactgtacgtttcc
cgtgatgacctgccggaaggcgtgtataacgaagaattcaaaaagtgggatctgggcgat
atcctgggtgcgcgcggtaagttgttcaaaactaaaaccggtgagttgtctatccactgt
agtgaattgcgtttgctgaccaaagcactgcgcccattgccggataaattccacggcctg
gctgatcaggaaacgcgctatcgccagcgctatctggatctgatcgctaacgatgagtcc
cgcaatacattcaaagttcgttcgcaagtgatggccggtattcgtagcttcatggtggaa
aaaggcttcatggaagtcgaaacacctatgatgcaagtgatccctggcggtgcttcagca
cgtccgtttgtgactcatcacaatgcgctggatatcgatatgtatttgcgtatcgcgcca
gaattgtatctgaaacgcctggttgtcggtggttttgaacgtgtgttcgaaatcaaccgt
aacttccgtaatgaaggtgtttcaccgcgccataatccagagttcactatgatggaactc
tatatggcttacgcggactacaaagacttgatcgtgctgactgaagagttattccgcact
ctgactgaaaatgtgctgggcagcagtgtggtgcagtatggcgaacagacatttgatttt
ggtaagcctttcgccaaattgaccatgaaagaagctatttgcaaataccgtcctgaaacc
aatgtggcagatttggacgatatggacaaagctgtggcaattgccgagtcattgggtatt
aaagttgagaaaagttggggcctgggccgtgttcaatgcgagatctttgaagagaccgcc
gagagccatctgattcagccaactttcattactgaatacccagccgaggtttctccattg
gctcgtcgcaatgacgataatccgtttatcactgaccgtttcgaattcttcatcggtggc
cgtgagattggtaacggcttctctgagctgaatgatgctgaagatcaggctcagcgtttt
gctgatcaagtcagtgctaaagaagctggtgatgacgaagcgatgttctacgatgaagac
tatgttaccgcgctggaacatggtttgccgccaactgcgggtctgggcatcggtatcgac
cgtatggtcatgttgtttaccaacagccatactatccgtgatgttatcttattcccggcg
atgcgcccggtaaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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