KEGG   Yersinia rochesterensis: CH54_71
Entry
CH54_71           CDS       T03609                                 
Name
(GenBank) pseudouridine synthase, RluA family protein
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
ykr  Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:ykr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ykr03009]
    CH54_71
Enzymes [BR:ykr01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     CH54_71
Ribosome biogenesis [BR:ykr03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CH54_71
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AJJ36763
Position
78859..79818
AA seq 319 aa
MKTNNPVVQLITISADEAGQRIDNFLLTKLKGVPKSMIYRIVRKGEVRVNKGRIKPEYKL
ADGDVVRVPPVRVAEREEIQVSAKLDKVAALADCILFEDDYLLVLNKPSGTAVHGGSGLS
FGVIEALRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLRLKGMQKDYLALV
RGQWQSHCKAVQAPLLKNIMQSGERMVKVSSEGKPSETRFKIEERFEHATLVKASPITGR
THQIRVHALHAGHPIAFDDRYGDREFDAQLQGTGLHRLFLHAAALRFEHPNTGETMRIEA
PLDNQLRHCLSVLRKNSAI
NT seq 960 nt   +upstreamnt  +downstreamnt
atgaaaacgaataatccagtagtacaattaatcaccatttctgccgacgaagccggtcag
cggatcgataactttttgctcactaaattgaaaggtgtgccaaagagtatgatttaccgc
atcgtacgcaaaggtgaggttcgagttaataaagggcgcattaagccagaatataaattg
gctgacggtgatgtggtgcgtgtgccgccggtacgggttgctgagcgcgaagaaattcag
gtatcagctaaacttgataaagttgccgcgttagccgattgcattctatttgaagatgac
tatctcttagtgctgaacaaaccttccggcactgcggtccatggcggaagcggtttaagt
ttcggggtgattgaagcattacgcgccctgcgcccggaagcgcgtttcctggaattggtc
caccgtcttgatcgtgatacctccggtgttttattagttgcaaaaaaacgttcagctttg
cgttccttacatgagcaactgcgcttgaaagggatgcagaaagattatttagctttggtg
cgcggacaatggcaatcacattgcaaagccgtgcaagcgcctttgctgaaaaatattatg
caaagtggtgaacgcatggtgaaagtcagtagcgagggcaaaccatcagaaacccgcttt
aaaatagaagagcgttttgagcatgccacactggttaaagctagcccgattaccggtcga
acacatcagattcgtgtccatgcgctgcatgctggccacccgatcgcttttgacgatcgc
tatggtgaccgtgaatttgatgcacaattacagggtactgggttacatcgtttattcctg
catgccgccgctttacgttttgaacacccaaataccggtgaaaccatgcgcattgaagca
ccgctggataatcaattgcgccattgcttgtcagtattacgcaagaatagcgctatttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system