KEGG   Yarrowia lipolytica: YALI0A06523g
Entry
YALI0A06523g      CDS       T01033                                 
Name
(RefSeq) YALI0A06523p
  KO
K03469  ribonuclease HI [EC:3.1.26.4]
Organism
yli  Yarrowia lipolytica
Pathway
yli03030  DNA replication
Brite
KEGG Orthology (KO) [BR:yli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    YALI0A06523g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:yli03032]
    YALI0A06523g
Enzymes [BR:yli01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     YALI0A06523g
DNA replication proteins [BR:yli03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RNase H
    YALI0A06523g
 Prokaryotic type
   Elongation factors (bacterial)
    RNase H
     YALI0A06523g
   Elongation factors (archaeal)
     YALI0A06523g
SSDB
Motif
Pfam: RNase_H Cauli_VI OmpH OEP
Other DBs
NCBI-GeneID: 2906024
NCBI-ProteinID: XP_499810
UniProt: Q6CHQ1
Position
A:complement(628919..630028)
AA seq 369 aa
MAKKYYAVKAGRKPGIYNSFAECDKQTERFPGAEWKGFDDYDKAQEYMSWIGDAGLSTRM
LVQLVQDTTADIHLFKINVAVKTDALEAALKNLEVTQRDLEAAQRDLEAAQNQLQEAELD
LRVAQKKIQAANSQKNGGQMFFVCENLIFDQEREAMRSAAQKFLPIESFLSLEEAIGYVE
EETDYALVFPPEQRGLHYSNSDGDIINQIFTDGACSRNGQKDAVAGFGLYLGENHKENLS
GRVYGSPQTNQRAELTAILHAYCICASKLSDGRLYEIYTDSSYAIDCLTKWHIAWERNGW
RNRGGEPVANQDVIKRILTLKAESTNCIGLKKVEAHGSSEGNKQADRLARQGVTAKNLFE
NIPNWFLNR
NT seq 1110 nt   +upstreamnt  +downstreamnt
atggccaaaaagtactatgctgtgaaagctggacgcaagcccggcatttacaactccttt
gctgagtgcgacaaacagacggaaaggtttccaggggcagaatggaagggcttcgatgac
tacgacaaggcgcaggagtacatgtcctggataggcgatgctggactttcgactcggatg
ctagttcaacttgtacaggacaccacggctgatatccacctgttcaaaatcaatgtcgct
gtgaaaactgacgccttggaagccgccttgaagaacttggaagtgacccagagagacttg
gaagcggcccagagagacttggaagcggcccagaaccagttgcaagaggcagagctggac
ttacgggtggcccagaagaagatccaggctgctaattcccagaaaaacggcggccagatg
ttctttgtttgcgaaaacctcatcttcgaccaggaacgagaggccatgagaagtgctgct
cagaaatttctacccattgagtcatttctgagcctcgaagaagctattgggtatgtggaa
gaagaaactgactatgctctcgtctttcctccagaacaacgaggtctacactattccaac
tcagatggagacattatcaatcagattttcactgacggcgcgtgctctaggaacggacag
aaagacgctgttgctgggtttggactctatctcggagagaaccataaggaaaacctctcc
gggcgtgtttatgggtcgcctcagaccaaccagagagctgagctaacggcaattcttcac
gcgtattgcatttgcgcatctaagctctcagatggccgactttacgagatttacaccgac
tcaagctatgccatcgactgtctcaccaagtggcacattgcgtgggaacgaaacggctgg
cggaaccggggcggggaaccagtggctaaccaggacgtgatcaagcgtatcctgacattg
aaggctgaaagcaccaattgcattggtttgaaaaaggtagaggcccatggttctagtgaa
ggaaacaagcaggcagatcggcttgcaaggcaaggtgtcactgctaagaatctatttgaa
aacattcctaattggtttttgaacaggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (39)   

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