KEGG   Yarrowia lipolytica: YALI0A19030g
Entry
YALI0A19030g      CDS       T01033                                 
Name
(RefSeq) YALI0A19030p
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
yli  Yarrowia lipolytica
Pathway
yli03040  Spliceosome
yli04139  Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:yli00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    YALI0A19030g
 09140 Cellular Processes
  09141 Transport and catabolism
   04139 Mitophagy - yeast
    YALI0A19030g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:yli03019]
    YALI0A19030g
   03041 Spliceosome [BR:yli03041]
    YALI0A19030g
   03032 DNA replication proteins [BR:yli03032]
    YALI0A19030g
Messenger RNA biogenesis [BR:yli03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     YALI0A19030g
Spliceosome [BR:yli03041]
 Complex A
  U1 snRNP components
   Sm proteins
    YALI0A19030g
  U2 snRNP components
    YALI0A19030g
 Complex B
  U1 snRNP components
    YALI0A19030g
  U4/U6.U5 tri-snRNP components
    YALI0A19030g
 Complex C
  U2 snRNP components
    YALI0A19030g
DNA replication proteins [BR:yli03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     YALI0A19030g
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 2906318
NCBI-ProteinID: XP_500227
UniProt: Q6CGI5
Position
A:join(2047248..2047292,2047393..2047453,2047870..2048081)
AA seq 105 aa
MGAGGIPLKLLSEAQGHVVTVELTSGHTYRGKLIEAEDNMNVQIRDVTVTARGGRVSHLE
QVYIRGSHVRFFSIPEMLKNAPMFRPQTLAAVRSSRGRGGRGRGR
NT seq 318 nt   +upstreamnt  +downstreamnt
atgggagctggcggaattccattaaaactcctcagcgaggctcagggtcatgttgtcacc
gttgagctcacttcaggacacacttatcggggaaaattgattgaagcggaggataacatg
aacgtgcagattcgagacgtgaccgtcactgcgcgaggaggccgagtgtcgcatctcgag
caggtttacatccgaggatcccacgtgcggttcttttccatccccgagatgctgaagaac
gcgcccatgtttcggcctcagactctggctgctgtgcgaagcagcagaggccggggcgga
cggggacgaggaagatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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