KEGG   Yarrowia lipolytica: YALI0B11726g
Entry
YALI0B11726g      CDS       T01033                                 
Name
(RefSeq) YALI0B11726p
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
yli  Yarrowia lipolytica
Pathway
yli03022  Basal transcription factors
yli03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:yli00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    YALI0B11726g
  09124 Replication and repair
   03420 Nucleotide excision repair
    YALI0B11726g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:yli03021]
    YALI0B11726g
   03400 DNA repair and recombination proteins [BR:yli03400]
    YALI0B11726g
Enzymes [BR:yli01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     YALI0B11726g
Transcription machinery [BR:yli03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     YALI0B11726g
DNA repair and recombination proteins [BR:yli03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     YALI0B11726g
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom DEAD AAA_22
Other DBs
NCBI-GeneID: 2907178
NCBI-ProteinID: XP_500771
UniProt: Q6CEZ1
Position
B:1574723..1577206
AA seq 827 aa
MLRSKRDASKRRFDDVNLDSDSFSDSNDSYSDDETYEKVPQTRLKIKMKEQDPGDATSGL
DTKVHSTYSEIPDDYVPDSVSNIFGKHDFSYLKLKPDHAARPLWINPEDGRIILESFSPL
AEQAQDFLVTIAEPISRPSHIHEYRITTYSLYAAVSVGLETSDIISVLNRLSKVPVPKSI
INFIHSCTKSYGKVKLVLKHNRYFVESSQADVLQMLLKDPVIGALRLEASEQSTTGSGLV
TESAPKMGDLKIPGTEKPKEEEGKDGERDGEKKADEDAEDIFSHVVGIENDDDDDLDAVH
SFEIAPDSVETVKKRCQEIDYPVLEEYDFRNDHGNPDLDIDLKSSTQIRPYQEKSLSKMF
GNGRARSGIIVLPCGAGKTLVGITAACTIRKSVIVLCTSSVSVMQWRQQFLQWCTIQPEN
VAVFTSESKEKFSGDAGLVVSTYSMVANTRNRSHDSQKMMDFLQSREWGFIILDEVHVVP
AAMFRKVVTNIAAHAKLGLTATLVREDDKIDDLNFLIGPKLYEANWMDLAQKGHIANVQC
AEVWCPMTSEFYQEYLKENARKRMLLYIMNPSKFQAAQFLINYHEKRGDKIIVFSDNVHA
LKAYALKLGKFFIFGGTPQQERMKILKNFQYNDQVNTIFLSKVGDTSIDLPEATCLIQIS
SHYGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMYYSTKRQAFLVDQGYAFK
VITHLHGMENLPDLAYASARERRELLQEVLLQNEDAATLEEGDNADSFVGRGSSNKRGSA
KRTTGSLASLAGGEDMAYIETNKNRNKDLRKPSKQSAFVKKLYSGKR
NT seq 2484 nt   +upstreamnt  +downstreamnt
atgctcagatccaagcgagacgcttctaaacgtcggtttgacgacgtcaatctcgacagt
gactccttctccgactccaacgattcatattccgacgatgagacatacgagaaggtgcct
cagacccgtcttaagatcaaaatgaaggaacaggaccctggagatgccacatcaggtctc
gataccaaggtgcattcgacctattcggagatccctgacgactacgtgcccgacagtgta
tccaacatcttcggtaagcacgacttctcatacctcaagctgaagccagaccatgccgct
cgacccttgtggattaaccccgaggacggtagaatcattctggaatccttttcgccactt
gcagagcaggctcaggacttcctggtgaccattgcagaacccatctctcgtccctcgcac
attcatgaatacagaatcaccacttactctctgtacgcggctgtctcagtgggtctggag
acttctgacatcatttccgttctcaaccgactgtccaaggtcccagtccccaagagtatc
atcaacttcatccactcatgtacaaagtcttatggtaaggtcaagttggttctgaaacat
aatcgatactttgtggaatcttcacaggcagacgtcttgcagatgctgctcaaggaccct
gttatcggtgctctgcgtctggaggcttcggaacagtccaccacaggctccggtcttgtt
actgagtcggcacctaagatgggcgatcttaagattcccggtacagagaagcccaaggaa
gaggaaggtaaggatggagaaagggacggtgagaagaaggctgacgaagacgctgaggat
atcttctctcatgttgttggtattgagaacgatgatgatgacgatctggacgctgttcac
tcgttcgagattgcacctgactcagtcgaaactgtgaagaagcgatgtcaggagattgac
taccctgtgttggaagagtatgatttccgaaatgatcatggtaaccccgatctggatatc
gacctcaagtcgtccacccagattcgaccctatcaggagaagtcgctgtctaaaatgttt
ggtaatggacgagcccgttctggtatcattgtcttgccatgtggagccggcaagactctg
gtcggtatcacagctgcttgcaccatccgaaagtccgttattgtgctttgcacctcctcc
gtatccgtcatgcagtggagacagcagtttctgcagtggtgtactattcagcctgagaac
gtggctgtgttcacttccgagagcaaggagaagttctctggtgatgctggtctcgttgtg
tctacttactcaatggtagccaacacccggaaccgatcccatgactcgcagaagatgatg
gacttcttgcagtctcgagagtggggttttatcattctggatgaggttcacgtcgtgccc
gccgccatgttccgaaaggtcgttactaacattgccgcacacgcaaagctgggtcttact
gcaaccctggtgcgagaagatgacaagattgacgacctgaatttcttgattggccccaag
ctgtacgaggccaactggatggacttggcccagaagggtcatatcgccaacgttcagtgt
gccgaagtgtggtgccccatgacctcagagttttaccaggagtacctcaaggagaacgct
cgaaagcgaatgctactctacattatgaatccctccaaatttcaggctgcccagtttctc
atcaactaccacgaaaaacgaggtgacaagatcattgtcttctctgataacgtccatgct
ctcaaggcttatgcactcaagcttggaaagttcttcattttcggtggcactccccaacag
gagcgaatgaaaattctgaagaacttccagtacaatgaccaggtcaacaccattttcttg
tccaaggtcggagatacttccatcgatttgcccgaggctacatgtctgattcaaatctcg
tcgcattacggctctcgacgtcaggaggctcagcgtctgggtcgtattctgcgagccaag
cgacgtaacgatgagggtttcaatgccttcttttactcgctagtgtccaaggatacccag
gagatgtattactcaactaaaagacaggccttcctggtcgatcagggttatgcgttcaag
gtgattacacatctgcatggaatggagaatctgcccgatctggcttatgcttctgctcgt
gagcgacgagagctgctgcaggaggtgttgttacagaacgaggacgctgccactctcgaa
gaaggagacaacgcagattcgtttgtgggccgaggttcttccaacaagcgaggcagtgcc
aagcgaaccaccggttctctggcatcgctggctggtggagaagatatggcatacattgag
accaacaagaaccgaaacaaggatctgcgaaagccttccaagcagagtgcatttgtcaag
aagctgtactccggaaagagatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (37)   

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