KEGG   Yarrowia lipolytica: YALI0D06457g
Entry
YALI0D06457g      CDS       T01033                                 
Name
(RefSeq) YALI0D06457p
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
yli  Yarrowia lipolytica
Pathway
yli03020  RNA polymerase
yli03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:yli00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    YALI0D06457g
  09124 Replication and repair
   03420 Nucleotide excision repair
    YALI0D06457g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:yli03021]
    YALI0D06457g
   03400 DNA repair and recombination proteins [BR:yli03400]
    YALI0D06457g
Transcription machinery [BR:yli03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     YALI0D06457g
  RNA polymerase III system
   RNA polymerase III
     YALI0D06457g
  RNA polymerase I system
   RNA polymerase I
     YALI0D06457g
DNA repair and recombination proteins [BR:yli03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      YALI0D06457g
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 2910489
NCBI-ProteinID: XP_502486
UniProt: Q6CA26
Position
D:828325..828963
AA seq 212 aa
MSSDDAQKLWKVYRTAKELVKDRGYTITDKEVNLSFDQFVSEMCDPMGKPIKKKMCFMAS
PSPEAIEKFPEMGNIWVEFCEEASVTVKTMRNFCIHISENKFATGILVYENNMTPSANRL
IPSVAPATIDTFQETDLLVNITKHVLVPTHIKLSGAEKKFLLERYRLKESQLPRIQREDP
VARYLGLRRGQIVKIIRRSETSGRYASYRICL
NT seq 639 nt   +upstreamnt  +downstreamnt
atgtcatcggacgacgcacagaagctttggaaagtgtaccgaacggccaaggagctggtc
aaggaccggggctacaccatcaccgacaaggaggtgaatctgtccttcgaccagtttgtg
tcggagatgtgtgatcccatgggcaagcccatcaagaagaaaatgtgtttcatggcgtct
ccctcgcccgaagccatcgaaaagttccccgaaatgggcaacatttgggtcgagttctgt
gaggaggccagtgtgacggtcaagacgatgcgaaacttttgcatccacatttcggaaaac
aagtttgccacgggtatcctggtgtacgaaaacaacatgactccgtccgccaaccgactc
atcccttcggttgctcccgccaccatcgacaccttccaggagaccgatctgctggtcaac
atcaccaagcacgttctggtgcccactcacatcaagctgtctggcgcagagaagaagttt
ctgctggaacggtaccgactgaaggagtcgcagctgccccgaatccagcgggaggaccct
gttgcgcggtacctaggtctgcgacgaggccagattgtcaagattatccgacggtcggag
acctctggacggtacgccagttaccgaatttgtctctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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