KEGG   Yarrowia lipolytica: YALI0D08756g
Entry
YALI0D08756g      CDS       T01033                                 
Name
(RefSeq) YALI0D08756p
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
yli  Yarrowia lipolytica
Pathway
yli03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:yli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    YALI0D08756g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yli03400]
    YALI0D08756g
DNA repair and recombination proteins [BR:yli03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      YALI0D08756g
SSDB
Motif
Pfam: Rad4 BHD_3 BHD_1 BHD_2 Transglut_core HAD_SAK_2
Other DBs
NCBI-GeneID: 2910673
NCBI-ProteinID: XP_502588
UniProt: Q6C9S4
Position
D:complement(1121358..1124009)
AA seq 883 aa
MGKRTVSQKDVTVTHFDMVREYQVTEKKRKIEPSAPVAKLPSRAKQEKGNTSSRPASVER
ASSQTTTFDLDADESSDEEDWEEVDIDPSASSTNAETGISVSFEPGASIAEESVIRGGWD
TKGTNVTSKKGKGKRTGPKLSREERQRRIQVHQIHIMALLKHASIRNAWANDLLLQMQLR
ETVPATKLTGLTPDKTQTKMVRTAKFYESLKYLLQQWAKIWYTDSRGLHKRDFNELDDIN
PDSYDPPVTKAIFNKKVIRHRGSRDLKVQGFVALLRAVGVQARLVVSLQPLDFASNTIVS
DLAAEKQPAEKASPSVLRKPKFSSTSGQSKSAQRSQSRMHYSESPTPVYWVEVFEPTGQK
WVSLDPACEVNMEVVGKAGKSRIEPSLQDKLNTLTYALAFNKEGTVTDVTRRYSSAYNSR
TRPARLTRYLAGSIWWNKLMGLYRPPITHASWAEEKFLRERVLAEGFPKNIQLFKNHPRY
VLERHLRQDEVLKEKNPCGIMSMKTNSKPENVYPRSDVQQVKSANKWYQIGRIIKPGQIC
KKRKKMAKSRFRLDEEEDSPMYSFDQTEAYIPQPVVDGQVPRNGYGNVDLFTPFMMPPGG
AHVRGKGAYMAAKSLGIDYANCVVGFDFTKGRQIKPRIDGVIVAEKYAKDVADVWSDMQE
QTLAKEERNREVRALLRWRRYLTALKIRHRLDAEHGEVELESGEEEEEDEEVRVEEVNEE
VKEKEENGVIIIDDNESDEPWYVPPSVLQPKLDQYLNKSAFRLDKPLNIVVDEPEEEKEE
EIPREASTLASTPSSTPCLTPPPRDSTTPRENGADKTRPSQLQRASSVVSVGSTDTISSE
EGNPLSELSSVIKSPVKIDYSSLAVADDSDSPDEMSESELYSE
NT seq 2652 nt   +upstreamnt  +downstreamnt
atgggtaaacgtacggtctcacagaaggacgtcaccgtcacgcatttcgacatggtccgc
gagtaccaggtcaccgaaaagaagcgcaaaatcgagccgtcggctccagtggcaaaattg
ccatccagagccaagcaagagaagggcaacactagcagccgaccagcaagcgtagaacgg
gccagttcgcagacaacgacgttcgatttggacgccgacgagagttccgacgaggaagat
tgggaggaggttgatatcgatccgtcggcaagctcaacgaatgcagaaactggcatctca
gtttcatttgagcctggagcttcaattgccgaagaatcagtcatcagaggagggtgggac
accaagggaacaaatgtaacgtccaagaagggcaaaggaaaacggacaggaccgaagctg
tcacgggaggaacgccaacgacgaattcaagtgcatcagatccatatcatggccttactc
aaacatgcttcgatacggaacgcctgggccaacgacttgctacttcaaatgcagctgcga
gagacggttccagctacaaagctcacaggactcacgcccgacaagacacagacaaaaatg
gtcagaactgcgaaattctacgaatcgctcaaatacttactgcaacagtgggccaagatc
tggtacacagactcccggggactccacaaacgggactttaacgagttagatgacatcaac
ccggactcgtacgacccgcccgtcaccaaggccatcttcaacaagaaggtgattcgacat
cgaggctccagagatctaaaggtgcagggatttgtggctctactgagagctgtaggggtg
caagcgagattggtggtctctctacaacctctggattttgcttccaacacaatagttagc
gatcttgctgctgaaaagcagcctgctgagaaagcttccccttcagttcttcgcaagccc
aagttcagcagcacttctggacagtcaaaaagtgcacaaagaagccagtcgagaatgcac
tactccgagtcgcctactcctgtatactgggtggaggtttttgagcctacaggccagaaa
tgggtcagtttggacccggcttgtgaagtgaacatggaagttgtgggaaaagcaggaaag
agtcgcattgagccatcgctacaggacaagctaaacactctgacatatgcattagcgttc
aacaaagaaggcaccgtcactgatgttacaagaaggtactcctcagcctacaactcccga
accagacctgcacgtctaactcgctatttggcgggcagtatctggtggaacaagctcatg
ggactgtatagacctcctatcacacatgcttcctgggccgaggaaaagtttctgagagag
agggtacttgctgaagggtttcccaagaacattcagttattcaagaaccatcctcggtac
gtgttggagcgccatttgcgtcaagatgaagtgctgaaggagaagaatccctgtggaatc
atgtcaatgaagaccaactccaagcctgagaacgtatatcctcgatctgacgttcagcag
gtcaagtcagctaacaagtggtaccagattggccggatcatcaagcctggtcagatctgc
aagaagcgaaagaagatggcaaagtctagattccgactggacgaagaagaagactctccc
atgtactcgtttgaccagaccgaggcctatattccgcaacctgttgttgatggtcaagtg
cctcgaaacggatatgggaacgttgacctgtttactcctttcatgatgccccctggagga
gcccatgtgcgtggaaaaggagcttatatggctgccaagtcgctaggaatcgattatgcc
aactgtgttgttggctttgacttcaccaagggtcgtcagatcaagccccgaatcgacggt
gtgattgtcgctgagaagtacgccaaggatgttgctgacgtttggtcagacatgcaagaa
cagacgctcgccaaggaggaacgaaatagagaggtacgagccctgttgcgatggagacgg
tacctgaccgctcttaagatcagacatagactcgatgctgagcatggtgaagtcgaactg
gagagtggcgaggaagaggaggaagatgaagaggtgagagtggaagaggtgaacgaggaa
gtcaaggaaaaggaagaaaacggcgtcattattatcgatgataatgaatcagacgaacct
tggtacgttccaccctcggtacttcagcctaaactggaccagtatcttaacaagagtgct
tttcgtctcgacaagccattaaatattgttgtcgatgagcctgaggaagaaaaagaagag
gaaataccaagggaggcttcaacgttggcttctacaccgagttcaacgccctgtttgact
cctcctcctcgtgattctactactccccgagaaaacggcgctgacaagacacgtccgtct
caactccaacgagcaagctcagtggtaagtgttggttctacagatacaatttcgagcgaa
gaaggcaaccctctgtccgaactttcaagtgtcatcaagtctcctgtcaagattgattac
tcttcgttagccgtagcagatgattccgattctcctgatgagatgagtgaatcggagttg
tacagtgagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (36)   

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