KEGG   Yarrowia lipolytica: YALI0D12452g
Entry
YALI0D12452g      CDS       T01033                                 
Name
(RefSeq) YALI0D12452p
  KO
K10597  ubiquitin conjugation factor E4 B [EC:2.3.2.27]
Organism
yli  Yarrowia lipolytica
Pathway
yli04120  Ubiquitin mediated proteolysis
yli04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:yli00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    YALI0D12452g
   04120 Ubiquitin mediated proteolysis
    YALI0D12452g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:yli04121]
    YALI0D12452g
Enzymes [BR:yli01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     YALI0D12452g
Ubiquitin system [BR:yli04121]
 Ubiquitin ligases (E3)
  U-box type E3
   YALI0D12452g
SSDB
Motif
Pfam: Ufd2P_core U-box
Other DBs
NCBI-GeneID: 2910140
NCBI-ProteinID: XP_502745
UniProt: Q6C9B7
Position
D:join(1551948..1551965,1552022..1555198)
AA seq 1064 aa
MSSAEEIRLKRLARLGGGASSPSPGPSESRKAEGTPKEEVKKEVKEVKEVKKDEPKSTPA
IKPKIKIVPKAAASAATGTSTPKSAAPRPAPAPSASLTVPFQQYEQDAIESILRITVRDK
QRCTQLASVKEELESENKPVALSRDNLEDALFSHLTGSKAVFNYLMESFLRAKKDLAVLN
KAGTDAVDVEPKKELVRNIMEMTTRYGLLFVSVPDMYEQAQGIMEVLKLSQNGSLSWEFV
DEIFSRAQTDGDMGSVAGKILQDVNGLILSANQDASQSATAALYFVSHLFSNKLFASAVP
EIEGFVESGTNDEKPADIEKNPHGLGPVFAISPLHGSTALTFFPIGTPEQMMDPRGNAAN
GVRAESRIVQDQLFQIVDKIVRASPQARDCILQYFGRVLKCNHRRRATRLQEGTTSSDGF
LLNIFFVLLKLADPFVDNACSKIDKIDIDYYSRTKNAVIDISEETKIHADSTEAAEYYGD
EKNADKKDLAPNFISHVFFLTAGYLYYGFGGAQQQVTRLKEHHDQVRDYLDNSRIQYANV
PEAQRGAVNMQLQKVEKMVGSLAAQRAAILAVISEQDVCVQVLQFAIFQMHYLIRVLDPS
HTYPLGGEVTLPLYTGENTGPIAYLPEYLIEGPVGIVNVMCRHNTILAMLSPLVDVSALV
TFGVVFLRHSDVIKNPHQKSKIVEMLFCGTQPIYNQNDGFLVSTFNSQKLALESLMHSLM
NIYIEFEQTGAHTQFYDKFNIRYYVSQIIESIWNNVNYQKRLEKESHDNIDFFVRFVALL
LNDVTYLMDESVSSLTEIRQIEAELAAMTEEEKNSTHAQELQKKFKTAERNIKGWMPLTN
KNMKLLDLFTQAVPKSFVSPEIVDRLAAMMNHNLKALVGPRCRDLKVKNMLKYGFDPKDL
LVKLSKAYYNLHKQDAFIQAVARDGRSFDPANFTRAIELISRFNLMPREYLDQIVALRDK
ASEVAAQDEEDEQDLGDIPDEYLDPLMYTLMTNPVILPSSKINIDLATIKSHLLSDPKDP
FNRAPLKLEDVLPNDELKLEIETWVEEKRSAAKTKDADGDVDMS
NT seq 3195 nt   +upstreamnt  +downstreamnt
atgtcatcagcagaagaaattcgtctcaagcgtctagctcgtctaggaggaggagcttcc
agtccctctcctggtccttccgagtccaggaaggcagaggggacacctaaggaggaggtg
aagaaggaggtgaaggaggtgaaggaagtgaagaaggatgagcccaaaagcacacctgcg
atcaaacccaagatcaagattgtgcccaaggccgctgcttctgccgccacaggcacatcg
accccaaaatccgctgcaccacgaccagctccagctccctcggcttcgctgaccgtgccg
ttccagcagtacgagcaggacgcaattgaaagcattctgcgaatcacagtgcgagacaag
cagcgatgcacgcaacttgcatcggtcaaggaggaactggagtcggaaaacaagcccgtg
gcgctctccagagacaatctcgaagatgcgctcttcagccacctcacaggatccaaggca
gtcttcaactatctcatggagagctttctgcgggccaagaaagacttggcagtgctcaac
aaggctggcacggacgctgtcgatgtagagcccaagaaagagctggtcagaaatattatg
gaaatgaccacccgatatggactgctgtttgtgtctgttccagacatgtacgagcaggcc
caaggcattatggaggtgctgaaactgtcacagaacggctcattgtcgtgggagttcgtg
gacgagatcttctcacgtgcccagaccgacggagacatgggctctgttgcgggcaagatt
ctgcaggacgtcaacgggctgattctcagcgccaatcaggacgcctcccagtcggccacc
gctgctctctactttgtgtcgcacctgttcagcaacaagctgtttgcttctgctgtgccc
gaaattgaaggctttgtcgaaagtggcaccaacgacgaaaaacccgcagacattgagaag
aacccccatggtctcggccccgtttttgccatttctcctttgcatggttctaccgctctc
accttcttccccatcggtactcctgagcaaatgatggatccccgtggcaacgccgccaac
ggagtgcgagccgagtcgcgaatcgtgcaggaccagctgttccagattgtcgacaagatt
gtgcgggcgtctccacaggcacgagactgtattctgcagtactttggccgcgtgctcaag
tgcaaccacagaagacgagccactcgactgcaagaaggcaccacatcttctgacggcttt
ctgctcaacatattttttgtgttgctcaaactggcagacccgtttgtcgataacgcctgt
tccaagattgacaagattgacattgactactacagccgaaccaaaaacgcggtaattgac
atttccgaggagaccaagatccacgccgactccaccgaggccgcagagtactacggagac
gaaaagaatgccgataagaaagacctggctcctaacttcatttcccatgtgtttttcctc
accgccggatacctatactacggttttggaggtgcccagcagcaggtgacacgtctcaag
gagcaccatgaccaggttagagactaccttgacaactcgcggatccagtatgccaatgtt
cccgaggctcaacggggagcagtgaacatgcagctacagaaggtggagaagatggtgggt
tctttggcggcccagcgagcagccattctggccgtcatctccgagcaggacgtgtgtgtc
caggtgctgcagtttgctattttccaaatgcattatctcatccgagttctggacccctct
cacacttatcccctgggtggcgaagttactctgcccctgtacactggagagaacacggga
cctattgcttacctccccgagtacctaatcgagggtcctgttggcattgtaaacgtcatg
tgtcgtcacaacaccattctggccatgttgtctcccttggtggacgtttctgctctcgtc
acctttggagtggtctttctgcgacactcggacgtgatcaagaacccacatcagaagagc
aagattgtagagatgttgttttgcggcacccagcccatctacaaccagaatgatggcttc
ttggtgtctacattcaactcgcagaaactggcactggagtcgcttatgcattcgctcatg
aacatctatatcgagtttgagcagactggagcacatactcagttctacgacaagtttaac
attcggtactatgtgtcgcagatcatcgagtctatctggaacaatgtcaactatcagaag
cggctggaaaaggaatcccatgacaacattgacttctttgtgcggtttgtggcgctgctg
ctcaacgatgtcacctatctcatggatgagtcggtcagcagtctcacggagattcggcag
attgaggcggaactggctgccatgaccgaggaagagaagaactccactcacgcccaggag
ctgcagaagaagttcaagacagccgagcgcaacatcaaggggtggatgcctctcaccaac
aagaacatgaagcttcttgatttgttcacccaggctgtccccaagtcgtttgtatcgccc
gaaatcgtcgaccgactagctgccatgatgaaccacaacctcaaggcgctggttggccct
cgatgtcgtgatctcaaggtcaaaaacatgctaaagtacggcttcgaccccaaggatctg
ctggtcaagctttccaaggcttactacaacctgcacaagcaggacgcgtttatccaggct
gtggctcgagacggccgatcgtttgacccggcaaacttcacacgtgctattgagctcatc
tcgcgtttcaaccttatgcctagagagtacctggatcagattgtggcacttcgagacaaa
gcctcggaggtggctgctcaggacgaggaggacgagcaggacctgggagatatccccgac
gagtacctggatcctctcatgtacacactgatgaccaaccctgtgatcctgccgtcgtcc
aagatcaatattgacctggctaccatcaagtcgcatcttctgtccgatcccaaggacccc
ttcaaccgagcgcctctcaagctggaggacgtactgcccaacgacgagctgaagttggag
attgaaacctgggtcgaggagaagcgaagtgcagccaagaccaaggatgccgatggggat
gttgatatgagctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   KEGG ORTHOLOGY (1)   
   RefGene (43)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (59)   

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