KEGG   Yarrowia lipolytica: YALI0E13101g
Entry
YALI0E13101g      CDS       T01033                                 
Name
(RefSeq) YALI0E13101p
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
yli  Yarrowia lipolytica
Pathway
yli03082  ATP-dependent chromatin remodeling
yli03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:yli00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    YALI0E13101g
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    YALI0E13101g
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:yli01009]
    YALI0E13101g
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:yli03021]
    YALI0E13101g
   03036 Chromosome and associated proteins [BR:yli03036]
    YALI0E13101g
Protein phosphatases and associated proteins [BR:yli01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     YALI0E13101g
Transcription machinery [BR:yli03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     YALI0E13101g
    SWI/SNF complex
     YALI0E13101g
Chromosome and associated proteins [BR:yli03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    YALI0E13101g
   PBAF complex
    YALI0E13101g
   SWI/SNF complex
    YALI0E13101g
SSDB
Motif
Pfam: SNF5 Herpes_UL42
Other DBs
NCBI-GeneID: 2911793
NCBI-ProteinID: XP_503887
UniProt: Q6C625
Position
E:1578234..1580465
AA seq 743 aa
MSFRQQFQQGGNPNGQMGFNNMNMSPNMNNAKIGGMDMGAQMGQMGQMGQMPQMAQMGQM
GQMGGMPQMGGPMGGQMNGMNMGGMSGAGGMPNVGGMPNMAGMPNMGQGMNMGQGMNPQV
GRGGPMGPQGMMGQQGMGGMQQGGQVQMGGGPQMQPPQRQPQPQQQQQQQQQQQQHHHQQ
QQQQVPMPQSQLIPQQGGIPVMAGGQPQKNFDFPPPGQTMMQPGLTVPPVQSHLGLVSSD
DARQQETPLVNPPSAAESLAEMPTLFNGQGITDLTEIMKNKRDPKTAQELNLRRFVSKDL
NESSTLPKKLKQEADKLNAKRYEISFYHSFGPIRSQEPQSIFQDGYLGYGNGWTGLNTRF
VYPRDRKKHNRNTRDLVLSRQQMNQQAAEPELLVPIRLDFDLGRLRLRDTFMWNLNEKTY
PVHFFVENMFEDFHFPHQYIQSVTNSITEQLQDFQPHQYPQDPRHVIGNGDATRNEDMRV
VVRLDITVGQHNLIDQFEWDINDSLNSPEEFAATMCAELSLSGEFATAIAHAIHEQTQVF
SKSLLLLGHTFDQRPVDDEDIRREICAPIPDGSVMRPKNSVNEYSPALFEISEAELSRLD
KDKDRDSRQKRRQGRAGRRGAPSLPDFKKVVRTFRTPVYSAVLPGAVDRKVELAKQALQA
EEEEEEEDSDGNVVVRPAKRQRTTGRHVPVRAAAANAAVAVAAQSQELETNYVEELADPT
SFWVTLKVPPQQLARLMMIPRFG
NT seq 2232 nt   +upstreamnt  +downstreamnt
atgtcgttccggcaacagttccagcagggaggcaatcccaatggacagatgggcttcaac
aacatgaacatgagcccaaacatgaacaacgcgaaaatcggaggcatggatatgggagcg
cagatgggccagatgggccagatgggccagatgccacagatggctcagatgggccaaatg
ggccagatgggaggcatgccgcaaatgggcggacccatgggtggccagatgaacggcatg
aacatgggtggcatgtccggagcaggtggcatgcccaatgtcggagggatgcccaacatg
gcaggaatgcccaacatgggtcagggtatgaacatgggccaaggaatgaacccccaagtt
ggtcgaggtggacccatgggacctcagggtatgatgggccagcagggcatgggcggcatg
cagcagggtggccaggtgcagatgggtggaggaccacagatgcaaccccctcagcgtcag
ccacagccacagcagcagcagcagcagcagcaacagcagcagcagcatcaccaccaacaa
cagcagcagcaggtgcctatgccgcaatcgcagctcatccctcagcaaggaggcatcccc
gtcatggctggaggtcaaccccaaaagaactttgatttccccccaccaggccagaccatg
atgcagcccggcctcactgtccctcccgtgcagtcacatctgggtcttgtgagttccgat
gacgcccgacaacaggagacacctctcgtgaaccctccctcggctgccgagtcgctcgcc
gagatgcccacgctgttcaacggccagggaattactgatctcacagagattatgaaaaac
aaacgtgaccccaagaccgcccaagaactcaacctgcgtcgttttgtatccaaggatctc
aacgagtcctccacgctgcccaaaaagctcaagcaggaggccgacaagctcaacgccaag
cgatatgagatctctttctaccactcgtttggtcccattcgttcgcaggagccccagtcc
atttttcaagacggatacctcggctatggcaatggttggacaggtctcaacacacggttc
gtgtacccccgtgaccgaaagaaacacaaccgaaacacccgggacctggtgctgtcgcgt
cagcagatgaaccagcaggcggcagaaccggaactgctggtgcccattcgtcttgacttc
gatctcggacgacttcgacttagagacaccttcatgtggaaccttaacgagaagacatat
cccgtgcactttttcgtggagaacatgttcgaggacttccacttcccccaccagtacatt
cagtcggtcacaaactccatcactgaacagctgcaggatttccagccgcatcagtacccc
caggaccctcgacacgtgattggcaacggagatgcgacccgaaacgaagacatgcgagtt
gtggtgcgcctggatatcacagttggtcagcacaatctaattgaccagtttgagtgggac
atcaacgattctctcaactccccagaagagtttgctgccaccatgtgtgccgagctgtct
ctgtctggagagtttgctactgctattgcccatgccatccatgagcagacacaggtcttt
tcaaagtcgctgttgcttcttggccacacctttgatcagcgacctgtggatgacgaggac
attcgacgtgagatttgcgctcccatacccgatggatccgtcatgagacccaagaactcg
gtcaacgagtactctcctgcgctgtttgagatttctgaggccgagctgagtcgtctggat
aaggacaaggaccgagactctcgtcagaaacgtcgacagggacgagccggcagacgaggc
gcaccttctctgcccgatttcaagaaggttgtccgaacgttccgaactcccgtttactcc
gctgtgcttcctggagctgtcgaccgaaaggtggagttggctaaacaggcacttcaggca
gaggaggaggaagaggaagaggacagtgatggaaacgttgtggtgcggcctgccaagcga
cagcgaaccaccggtagacatgttccagtgcgagctgctgctgctaatgccgctgtggct
gtggctgcacagagccaggagctggaaaccaactatgtggaggagctggcggatcctact
tcattctgggtcactctgaaggtgcccccacagcagcttgcgcggctgatgatgattcct
cggtttggataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (45)   

Download RDF
DBGET integrated database retrieval system