KEGG   Yersinia massiliensis: DA391_01630
Entry
DA391_01630       CDS       T05402                                 
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
yma  Yersinia massiliensis
Pathway
yma03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:yma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DA391_01630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yma03400]
    DA391_01630
DNA repair and recombination proteins [BR:yma03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DA391_01630
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DA391_01630
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 RsgA_GTPase DnaJ_CXXCXGXG AAA_25 nSTAND3 Viral_helicase1 AAA_23 NACHT cobW ScfRs ExoX-like_C
Other DBs
NCBI-ProteinID: AVX36471
UniProt: A0A2R4NK10
Position
complement(360428..363259)
AA seq 943 aa
MDNIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGRRLMLLAPVVQDRKGEHTKMLENLAMQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVRDDMAQRLAESFETALELSGGTAVVADMDDP
QAEELLFSANFACPICGYSMSELEPRLFSFNNPAGACPTCDGLGVQQFFDPDRVLQNPEL
SLAGGAIRGWDRRNFYYFQMLRSLADHYKFDIEAPFDSLDATIQKAVLYGSGKDTIEFKY
INDRGDTTVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRSCASCSGTRLRREARY
VFVQNTTLPEISELSIGHALSFFQDMKLSGQRAQIAEKILKEIGDRLKFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGTVDDIMAAPNSLTGQFLSGKREIEI
PAKRVAGDPSKVLKLIGASGNNLKDVTLTLPVGLFSCITGVSGSGKSTLINDTLYPIAQS
RLNGATNNEPAPYREIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGVPE
SRARGYTPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEVKY
KGKSIHEVLAMTIEEAREFFDAVPALARKLQTLMDVGLSYICLGQSATTLSGGEAQRVKL
SRELSKRGTGQTLYILDEPTTGLHFADIQQLLAVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAQCAASHTARFLKPMLQPK
NT seq 2832 nt   +upstreamnt  +downstreamnt
atggataatatcgaagttcggggcgctcgcacccataatcttaagaatatcaacttgatc
atcccgcgcgacaaactgattgttgtcaccggcctatcgggttcaggcaagtcctcgttg
gcttttgataccctgtatgccgaggggcaacgccgttatgttgagtctctctctgcctat
gcgcgccaatttctatcgctgatggaaaaaccggatgtcgaccatattgaaggtctgtca
ccggccatttccattgagcaaaaatcgacatcccataacccgcgttccaccgtggggacc
atcaccgaaattcatgactatctacgtttgctgttcgcccgcgtcggtgaaccacgttgc
cctgatcacgatgtcccgttggcggcacaaaccgtcagtcagatggtcgataatgtttta
agtcagcctgaaggccgccgcctgatgctactcgcgcccgtggtacaagatcgcaaaggc
gaacataccaaaatgctggaaaatctggcgatgcagggctatatccgagcacgaatcgac
ggcgaggtttgcgatctgtcagacccacccaagttagagctgcaaaagaaacataccatc
gaagtggttatcgaccgctttaaagtacgtgacgatatggcgcagcgtcttgctgaatca
tttgaaacggcactcgagctatctggcggcacggctgtcgtcgccgatatggacgatcct
caggctgaagaattgttattctccgccaactttgcctgcccaatttgcggctatagcatg
agcgagttggaaccgcgcctgttctccttcaacaaccccgcaggtgcctgcccgacttgt
gatggcctcggcgtacaacagttctttgaccctgatcgcgtactgcaaaatcctgagtta
tcgctggccggtggcgcgattcgcggctgggatcgccgtaacttttattatttccagatg
ctacgctcactggcggatcattataagtttgatatcgaagccccctttgactcactagac
gccacgatacaaaaagccgtgttgtacggctccggcaaagataccattgagttcaaatac
attaacgatcggggtgataccaccgtccgccgtcatccttttgaaggggtgctgcacaat
atggaacgccgttataaagagacggaatccagtgcagtgcgcgaagagttggcaaaattt
atcagtaatcgttcctgtgcttcatgcagcggtacgcgtctgcgcagagaagcacgttac
gtcttcgtacaaaacaccacgttgcccgagatttccgaactgagtatcggccatgcattg
agtttcttccaagacatgaaactgagtggccaacgagcgcagattgccgagaaaatcctg
aaagaaattggtgaccgcctcaaattcttggtcaacgtcgggctgaattatctgtcattg
tcacgctcggccgaaaccctgtcagggggtgaagcacagcgcatccgcttagcgagccag
attggcgcaggtttggttggcgtcatgtatgtgctggatgagccatccattggcttgcac
cagcgtgataacgagcgtttgttggaaacactgattcacctgcgtaatctgggtaatacc
gtcattgtggtagagcatgatgaagatgcgatccgcgccgcagaccatgtgatagatatt
ggcccaggagccggtgtacacggtggtgaagtggtcgcagaaggcaccgtagatgacatc
atggctgcgccaaactctttgaccggtcaattcttgagtggcaagcgagaaatcgagatc
ccagctaaacgcgttgccggtgatcccagtaaagtattaaaactgattggggcgagcggc
aacaacctgaaagatgtcacccttaccctgccggttgggctatttagctgtattaccggt
gtttctggttcaggtaagtcgacgttgatcaacgatacactctaccccatcgcgcagagc
cgattaaatggtgcaaccaacaatgagccagcaccttaccgcgaaatccaagggttggag
catttcgataaagttatcgatatcgaccaaagcccaattggccgtactccgcgctcaaac
cctgcgacctataccggtatctttacgcctatccgggaattattcgccggtgtacctgaa
tcacgcgctcgcggttacacaccgggccgtttcagctttaacgtcaaagggggtcgctgc
gaggcttgtcagggtgatggggtgattaaagtcgaaatgcacttcctacccgatatctat
gtgccttgtgaccagtgtaaagggaagcgttataaccgtgaaacgctggaagtgaagtac
aaaggtaagagcattcacgaagtcttggcaatgactatcgaagaggcgcgtgagttcttt
gacgccgtgccagcactggcacgtaagctgcaaacgttgatggatgttggtttgtcatat
atttgtctggggcaatcggcgaccactttgtctggtggggaagcccagcgggttaaatta
tcgcgtgaactgtcaaaacgcggcaccggtcagaccttatatattctggatgaaccgacg
actggcctgcattttgctgatatccagcaactcctggcggtgctgcatcagttacgggat
cagggcaataccattgtggtcattgagcataatctggatgtgattaagacagcagattgg
attgtcgatttagggccagaaggtggcagtggtggtggcgagattttagtctcaggcacg
ccagaaaccgtcgcacaatgcgccgcatcccatacggctcgtttcctcaagccgatgcta
caaccgaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (25)   

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