KEGG   Yersinia massiliensis: DA391_18115
Entry
DA391_18115       CDS       T05402                                 
Name
(GenBank) fimbrial biogenesis outer membrane usher protein
  KO
K07347  outer membrane usher protein
Organism
yma  Yersinia massiliensis
Pathway
yma02020  Two-component system
Brite
KEGG Orthology (KO) [BR:yma00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    DA391_18115
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:yma02000]
    DA391_18115
   02044 Secretion system [BR:yma02044]
    DA391_18115
   02035 Bacterial motility proteins [BR:yma02035]
    DA391_18115
Transporters [BR:yma02000]
 Other transporters
  Pores ion channels [TC:1]
   DA391_18115
Secretion system [BR:yma02044]
 Chaperone-usher system
  Type 1 pilus assembly protein
   DA391_18115
Bacterial motility proteins [BR:yma02035]
 Pilus system
  Fimbrial proteins
   DA391_18115
SSDB
Motif
Pfam: Usher PapC_N PapC_C
Other DBs
NCBI-ProteinID: AVX39413
UniProt: A0A2R4NTF3
Position
complement(3885858..3888443)
AA seq 861 aa
MILSQKLTSCLRTNDRALPRNTLALLVLMSCQNTWAEDYFEPELLSLGAGGTDVDLSAFS
HAGGVGEGRYLVTIFVNQHEAVSRDLMFGKNTHGNIAPELTPELLNALGVNVDQLPAFKD
LPKDKPVDDLSALIPESTVKFDLSRLRLDISIPQVAMQPGRDSQFDPTQWDDGIPAMLFN
YNLSAGRNEQTTNSEQHTTNNVFANVQAGANAGAWRLRSTITHSHSDSNNNGSSDSTNFS
STYLSRDIRSWRSRLTMGEANTGSDVLDGVPFLGVQLSSSEQMMPARLRGFAPQINGVAN
SNARVTVRQNGYVVYETYVAPGPFEIKDLFQAGMSGDLDVSVTEADGSVRTFVVPYSSLP
VMLRPGAMKYEVTAGRYDGGTTQGSRESEFVLATLIYGLPKNLTLYGGALASQNYSALSM
GSGISMGDFGAMSVDGTFSSTKFEDEERQAGGSWRMRYSKSMLTTGTSMDLTALRYSTRN
YYSFAEYNSMGYAQREDVSPWTLSRRRSSFQTQVTQQLGGYGSVSLRANRDNYWGSTKTL
TSLSAGYNGSYHSVSYGLYYTIDRMKDNGNWPENRQISFNLNVPFSIFSHSSALQNTFAS
SQVTHNNQGRTQNQAGISGSDRDGALSYRVMQGWGNQGQASNSNLNLGYQGSKGNIAAGY
GYSNDMRSMNVNMSGGAVVHAEGITLSRTLGSSVALVSAPGAGGVSLSNGGGKIDSRGFG
VVPYLSDYTRNSIGLDPSTLPDGVDLPQNQQTVYPTNGAVVKTKFATRIGYQVLINLTRA
GGAGVVPFGATASLLDNASGEEISSIVGDDGQVYLTGLPQKGQLSVSWGKGDDKQCRVSY
NLNGLEPTPQMPVIQLNGECR
NT seq 2586 nt   +upstreamnt  +downstreamnt
atgatcttgagtcagaaattgacttcctgtttaagaacaaatgaccgcgccttaccgcgc
aatacacttgcgctcttagtattaatgagttgccagaacacttgggctgaggattacttc
gagcctgaattactttcgctgggggcgggggggactgatgtcgatctctcggcattttcc
catgctggcggggtgggggaaggtcgctatctggtcaccatatttgtgaaccagcacgaa
gcagtatcccgtgatctgatgtttggcaaaaatacacacggcaacattgcgccagaactg
acgccagaattactcaacgcactcggcgttaacgttgaccagttgcccgcgtttaaggat
ttaccgaaagataagccagtggatgatttgtccgcgcttatcccagaatccacggtgaaa
ttcgacttatcgcgcttgcgtctggatatcagtattccgcaggtggcgatgcagccaggc
agagacagccagtttgatcctactcagtgggacgatgggatccctgcaatgttgtttaac
tacaacctgagtgccggacgtaacgaacagacaaccaatagcgaacaacacacgactaac
aacgtctttgctaacgtgcaagcgggggcgaatgcgggggcgtggcgtctgcgcagtacc
atcacgcacagccattctgattcgaataataatgggagtagcgacagtacgaatttctcc
agtacctacttgtcgcgcgatatccgtagttggcgttcacgcctgacgatgggtgaagcc
aataccggaagcgacgtgctggacggtgtgccgttcctcggtgtacagctgagttcgtca
gaacaaatgatgccggcacgtttgcgcggttttgccccgcagataaacggcgtggctaac
agtaatgcgcgtgtcactgtgcgccagaatggctatgtggtgtatgagacttacgtggca
cctggcccatttgaaatcaaagatctctttcaggcaggcatgtccggtgacctcgatgtg
tcggtcacagaagctgatggcagtgtccgtaccttcgtggtgccctattcctccctgcca
gtgatgctgcgtccgggggccatgaaatatgaagtcacggcgggccgctatgatggcggg
accacgcaaggttcgcgcgaatctgagtttgtgctggccacgctgatatatggcttaccg
aaaaacctgacgctgtatggcggcgcattggcttcacaaaactacagtgcgttgagtatg
ggttccggtatttcaatgggtgattttggcgccatgtccgttgatggaaccttctccagc
acgaagtttgaagatgaagaacgtcaggctgggggttcatggcgcatgcgttattccaaa
agtatgttgaccacaggaacgtcaatggacctgactgcgctgcgttattccacgcgaaat
tattacagttttgcggaatacaacagcatgggttatgcccagcgggaagatgtctcgcct
tggacattgagtcgccgccgcagcagtttccagactcaggtcacccaacaattaggtggc
tatggttcggtgagcctgcgtgctaaccgtgataattattgggggtcaacgaaaaccctg
actagcctatcggcaggttataacggcagctatcacagtgtgagctatgggctttactac
acgattgatcggatgaaagacaatggtaactggccggaaaatcgccagatttcatttaac
ctaaacgtgcctttcagcatatttagtcactcgtctgcgttgcaaaatactttcgcgagc
agtcaggtgacccataacaatcaaggacgcactcagaaccaagcgggtatttctggtagc
gaccgagacggtgcgctttcttaccgtgtgatgcaagggtggggtaatcaaggtcaggcc
agtaacagcaacctcaatctgggctatcaaggcagtaaaggcaacattgctgcgggttac
ggctactcgaatgacatgcgttcgatgaacgtcaacatgagcggtggggcggttgtccat
gctgaaggcataacgctgtcacgcacattaggcagttcagtggcgttggtgagtgcgccg
ggagccggaggtgtcagcctttccaacggcggtgggaagattgattcgcgcggtttcggt
gtggtgccttatctgtcggattacacacgtaacagcattggccttgaccctagcacatta
ccggacggtgtcgatttgccgcagaaccagcagacggtctatccgaccaacggcgcagtg
gtgaaaacgaaattcgcgacgcgtattggttatcaagtattgattaatttgactcgtgcg
ggtggggctggtgtggtgccgttcggggcgaccgcctcattgctggataacgccagcggt
gaagaaatcagcagtattgtcggtgatgacggacaggtttacctgaccggtttgccgcaa
aagggccaactgtctgtgtcgtggggtaagggcgacgataaacagtgtcgcgtcagttac
aaccttaacgggctagaaccaacaccgcagatgccggttatccagttgaatggcgaatgt
cgctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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