KEGG   Alloyangia pacifica: CEW88_07565
Entry
CEW88_07565       CDS       T05431                                 
Name
(GenBank) ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
ypac  Alloyangia pacifica
Pathway
ypac00230  Purine metabolism
ypac00240  Pyrimidine metabolism
ypac01100  Metabolic pathways
ypac01232  Nucleotide metabolism
Module
ypac_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
ypac_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:ypac00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    CEW88_07565
   00240 Pyrimidine metabolism
    CEW88_07565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ypac03400]
    CEW88_07565
Enzymes [BR:ypac01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     CEW88_07565
DNA repair and recombination proteins [BR:ypac03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    CEW88_07565
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TACO1_YebC_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: AWI83549
UniProt: A0A2U8HCF0
Position
1:complement(1583794..1587396)
AA seq 1200 aa
MKIERRYTTAGQDAYAGIDFVTTTSEIRNPDGSSVFKLEGMEVPAGWSQVASDVIAQKYF
RKAGVPSALKKVREAGVPEFLWRAIPAETDTPRGGETSAKQVFDRLAGAWTYWGWKGGYF
TAEADARAYFDEMRHMLASQTAAPNSPQWFNTGLHWAYGIDGPGQGHFYVDHKTGKLTKS
KSAYEHPQPHACFIQSVSDDLVNEGGIMDLWVREARLFKYGSGTGTNFSSLRAENERLSG
GGKSSGLMGFLKIGDRAAGAIKSGGTTRRAAKMVIVDADHPDIEDFINWKVREEQKVASI
VAGSKMHEKMLNAIFDAIRQWDGAEADGYEPTVNTALKTAVRDAKKLAIPETYIKRVLDY
AKQGYASIEFPTYDTDWDSEAYASVSGQNSNNSIRVTDAFLQAVRDDADWKLIRRTDGTI
AKTLKARDLWEQVGHAAWACADPGIQFHDTVNAWHTCPEDGAIRGSNPCSEYMFLDDTAC
NLASMNLLTFLKDGKFDADSYVHATRLWTLTLEISVLMAQFPSKEIAQLSYDFRTLGLGY
ANIGGLLMTMGLSYDSAAGRALCGALTAVMTGTAYATSAEIAAELGTFAGFDRNREHMLR
VIRNHRAAAHGKSDGFEALAVTPVPLDHANCPDQALVELAKSAWDEALELGEKHGYRNAQ
TTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRSVPAALAGLGYTPSQI
EEITAYAVGHGSLGNAPGVNHTALIGHGFGKAQLEKIEAALATAFDIRFVFNQFTLGEEF
CRGTLGIPAKKLSDPSFDLLRHLGFSKAEIEAANDHVCGTMTLEGAPFLKDEHLGVFDCA
NPCGKRGKRYLSVDSHIQMMAAAQSFISGAISKTINMPNSATIEDCQKAYELSWSLGVKA
NALYRDGSKLSQPLAAALVEDDEEAQEVLETGTPAAKAQVLAEKVIEKVVIKELVRSHRE
KMPDRRKGYTQKAVVGGHKVYLRTGEYGDGSLGEIFIDMHKEGAGFRAMMNNFAIAVSVG
LQYGVPLEEFVDAFTFTKFEPAGMVQGNDSIKNATSILDYVFRELAVSYLDRTDLAHVKP
SGASFDDLGRGEEDGLGNVEELSESAATRSLEVLKHISSSGYLRKRLPQELSALGTLISE
ERPAVSSVAMSTSSLAMDARTKARMQGYEGEACGECGNYTLVRNGTCMKCNTCGGTSGCS
NT seq 3603 nt   +upstreamnt  +downstreamnt
atgaagatcgagagacggtataccacggcggggcaggacgcctatgcgggcatcgacttc
gtcaccaccacctccgaaatacgtaacccagacggcagttcggtcttcaagctcgagggc
atggaggtgcccgccggctggagccaggttgcttcggacgtgatcgcgcagaagtacttt
cgcaaggcgggcgtgccctcggcgctgaagaaggtgagggaagccggtgttcccgagttc
ctctggcgcgcgattcccgccgagaccgatacaccgcgcggcggcgagacctcggccaag
caggtcttcgatcgtctggcaggtgcctggacctactggggctggaagggcggctatttc
accgccgaggccgacgcgagggcctacttcgacgagatgcgccacatgctggccagccag
accgccgcgccgaactcgccgcaatggttcaacaccgggctgcactgggcctacggcatc
gacggccccggccagggacatttctacgtcgaccacaagaccggcaagctcaccaagtcc
aagtctgcctacgagcacccgcagccgcatgcctgcttcatccagtcggtcagcgacgac
ctggtgaacgagggcggcatcatggacctctgggtgcgcgaggcgcggctgttcaaatac
ggctcgggcaccggcaccaacttctcgtcgctgcgcgccgagaacgagcggctttcgggt
ggcggcaaatcctccggcctcatggggttcctcaagatcggcgaccgcgctgccggggcg
atcaagtccgggggcaccacccgccgcgccgcgaagatggtgatcgtcgatgccgatcac
ccggacatcgaggacttcatcaactggaaggtccgcgaagagcagaaggtcgccagcatc
gttgcgggctcgaagatgcacgaaaagatgctcaacgcgatcttcgacgcgatccggcaa
tgggatggggccgaggcggatggctatgagcccacggtcaacacggcgctgaagacggcg
gtgcgcgatgcgaaaaagctcgccattccagagacctacatcaagcgggtgctggattac
gccaagcagggctacgccagcatcgagttcccgacctacgacaccgactgggacagcgag
gcctatgccagcgtctcgggacagaactccaacaactcgattcgcgtcaccgatgccttc
ctgcaggccgtgagggacgatgccgattggaagctcatccggcgcaccgacggaaccatc
gccaaaactttgaaagcgcgcgatctttgggagcaggtcgggcatgctgcctgggcttgc
gccgatccggggatccagttccacgacacggtcaacgcctggcacacctgtcccgaggac
ggcgccatccgtggctcgaacccgtgctcggagtatatgttcctcgacgacaccgcctgc
aatctcgcctcgatgaacctgctgaccttcctcaaggacggcaagttcgacgcggacagc
tatgtgcatgccacgcggctctggacgctgacgctcgagatctcggtcttgatggcgcag
ttcccgagcaaggaaattgcccaactttcctatgatttccgtacccttggacttggatat
gccaacatcggcgggctgctgatgaccatggggctgagctacgacagcgccgcaggtcgg
gcgctctgcggcgcgctgaccgccgtgatgaccggcacggcctatgccacctcggccgag
atcgccgcagaactgggcacctttgcaggcttcgaccgcaaccgggaacacatgctgcgg
gtgatccgcaaccaccgcgccgccgcccacggcaagtcggatggcttcgaggcgctggca
gtcacacccgtaccgctggatcacgcgaactgtcccgaccaagcccttgtcgagcttgcg
aaatccgcatgggacgaggcgctggagctgggcgagaaacacggttaccgcaatgcccag
accacggtgatcgcaccgaccggcacgatcggcctcgtgatggactgcgacaccaccggc
atcgagcccgactttgctctggtgaagttcaagaagctcgcaggcggcgggtatttcaag
atcatcaaccgctcggtgcctgcagcgctggcgggtcttggctacacacccagccagatc
gaggagataaccgcctatgcagtcggccacggctcgctcggcaatgcgccgggcgtgaac
cacacggcgttgattggccatggcttcggcaaggcgcaactcgagaagatcgaggccgcc
ctggccaccgccttcgacatccgctttgtcttcaaccagttcacgctgggcgaggagttc
tgccgcggcacgctgggcattccggccaagaagctctcggaccccagcttcgacctgctg
cggcacctcggcttcagcaaggccgagatcgaggcggcgaacgaccatgtctgcgggacc
atgacgctcgagggtgcgcccttcctcaaggacgagcatctcggcgtcttcgactgcgcc
aacccctgcggcaagaggggcaagcgctacctcagtgtcgacagccacatccagatgatg
gccgcggcgcagagcttcatctcgggggcgatctccaagaccatcaacatgcccaactcg
gccaccatcgaggattgccagaaggcctacgagctgtcgtggtcgctgggggtcaaggcc
aatgcgctctaccgcgacggctccaagctcagtcagccgctcgccgcggcgctggtggag
gatgacgaggaggcgcaggaggtgttggagaccggcacccccgccgccaaggcgcaggtg
ctggccgagaaggtcatcgagaaggtggtgatcaaggagctggtgcgctcgcaccgcgaa
aagatgcccgaccgccgcaaggggtacacccagaaggcggttgtcggcggccacaaggtg
tatttgcgcaccggcgaatacggcgacggctcgcttggcgagatcttcatcgacatgcac
aaggaaggcgcgggcttccgggcgatgatgaacaacttcgccatcgcggtgtcggtgggc
ctgcaatacggcgtgccgctggaggaattcgtcgacgccttcaccttcaccaagttcgag
ccggcgggcatggtgcagggcaacgacagcatcaagaacgcgacctcgatcctcgattac
gtgttccgcgagctggcggtgtcctatctcgaccgcacggatctcgcccatgtgaaaccc
tcgggcgcgtccttcgacgatctcggacgcggcgaggaagacgggctcggcaatgtcgaa
gaactgagcgaaagcgccgcaacccgctcgctagaggtgctcaagcatatctcttcgtcg
gggtatctgcgcaagcggctgccgcaggagctttcggcgctcggcacgctgatctccgag
gagcgcccggcggtgagctccgtggcgatgagcacctcgtcgctcgccatggacgcgcgc
acaaaggcacgcatgcagggctacgagggcgaggcctgcggcgaatgcggcaactatacg
ctggtgcgcaacggcacctgcatgaagtgcaacacgtgcggcggcacgtcgggctgcagc
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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