KEGG   Alloyangia pacifica: CEW88_10925
Entry
CEW88_10925       CDS       T05431                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
ypac  Alloyangia pacifica
Brite
KEGG Orthology (KO) [BR:ypac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ypac03009]
    CEW88_10925
   03016 Transfer RNA biogenesis [BR:ypac03016]
    CEW88_10925
Enzymes [BR:ypac01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     CEW88_10925
    5.4.99.29  23S rRNA pseudouridine746 synthase
     CEW88_10925
Ribosome biogenesis [BR:ypac03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CEW88_10925
Transfer RNA biogenesis [BR:ypac03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    CEW88_10925
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AWI84148
UniProt: A0A2U8HED4
Position
1:2272278..2272925
AA seq 215 aa
MSAEYTPPQGEIPILHADHEILVVDKPAGLLSVPGKGPELADCLIERLKQAFPQVLLVHR
LDRDTSGVMVFALTPHAQRHIGLQFEHRRTKKTYLARVAGKLEPKTGHIDLPLIVDWPNR
PKQMVCHETGKPAQTDWRVIKSSDEESRVHLMPLTGRSHQLRVHMLAQGHPILGDPFYAP
ETEANYPRMMLHAEELRLRHPDGGLGLKFRAPAPF
NT seq 648 nt   +upstreamnt  +downstreamnt
atgagcgctgaatacacccctccgcagggcgagatcccgatcctgcacgcggaccacgag
atcctcgtggtcgacaagcccgccgggctgctctcggtgcccggcaagggcccggagctg
gccgactgcctgatcgaacggctcaagcaagccttcccgcaggttctgctggtgcaccgg
ctcgaccgcgacacctccggcgtgatggtctttgccctgacgccgcacgcgcagcgccac
atcggcctgcagttcgaacatcgccgcaccaagaagacctacctcgcccgcgtcgccggc
aagctcgagccgaagaccggccatatcgacctgccgctgatcgtcgactggcccaaccgc
cccaagcagatggtctgccatgagaccggcaagccggcgcagaccgactggcgggtgatc
aagtccagcgacgaggagagccgggtgcacctcatgccactcaccggccgcagccaccaa
ctgcgggtgcacatgctggcgcagggtcacccgattctcggcgatcccttctacgcgccg
gagaccgaggccaactatccgcgcatgatgttgcacgccgaagagctgcgcctgcgccac
cccgacggcggcctcggcctcaagttccgcgcccccgccccgttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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