KEGG   Yersinia pseudotuberculosis PB1/+ (serotype 1B): YPTS_0661
Entry
YPTS_0661         CDS       T00744                                 
Name
(GenBank) pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
ypb  Yersinia pseudotuberculosis PB1/+ (serotype 1B)
Brite
KEGG Orthology (KO) [BR:ypb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ypb03009]
    YPTS_0661
   03016 Transfer RNA biogenesis [BR:ypb03016]
    YPTS_0661
Enzymes [BR:ypb01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     YPTS_0661
    5.4.99.29  23S rRNA pseudouridine746 synthase
     YPTS_0661
Ribosome biogenesis [BR:ypb03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    YPTS_0661
Transfer RNA biogenesis [BR:ypb03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    YPTS_0661
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: ACC87645
Position
complement(738044..738664)
AA seq 206 aa
MIVLYQDKHIMVVNKPSGLLSVPGRAPENKDSVMTRVQNDFPTAESVHRLDMATSGVIVV
ALTKAAERELKRQFREREPKKTYIARVWGHLAQDEGLIDLPLICDWPNRPKQKVCYETGK
SAQTEYQVISRDDDGSTRVKLSPITGRSHQLRVHMLAMGHPILGDGFYAHPEAKAMASRL
QLHAQQLCITHPEFGTPMHFKCEAEF
NT seq 621 nt   +upstreamnt  +downstreamnt
atgatcgttttgtatcaagataagcacatcatggtcgtcaacaaacccagtgggttgctt
tccgtgccgggccgcgcaccagagaataaagacagcgtcatgacgcgtgttcagaatgat
tttcccaccgctgagtctgtgcatcggctagatatggcgaccagtggtgtgattgtggtt
gcattaaccaaagccgctgagcgtgagcttaagcgccagtttcgtgagcgtgaacccaag
aagacctatattgcacgggtttggggccatttagctcaggatgaagggctgattgattta
cccttaatttgtgactggccgaatcggccaaaacaaaaagtttgctatgaaaccggtaag
tctgcgcaaacagaataccaagtgatctcacgtgatgacgatggcagtaccagagtgaag
ctatcacccattacagggcgttcacatcaattacgggttcatatgttagccatggggcac
cctatcctcggtgatggtttctatgcccatccagaagccaaagcgatggcatcgcggctg
cagctacatgcacagcagttatgcattacccatccagagtttgggacaccaatgcatttc
aaatgtgaagcggaattttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system