KEGG T00744: YPTS

Yersinia pseudotuberculosis PB1/+ (serotype 1B): YPTS_0679

Entry

YPTS_0679         CDS       T00744

Name

(GenBank) type VI secretion protein IcmF

K11891

type VI secretion system protein ImpL

Organism

ypb Yersinia pseudotuberculosis PB1/+ (serotype 1B)

Pathway

ypb03070

Bacterial secretion system

Brite

KEGG Orthology (KO) [BR:ypb00001]
09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    YPTS_0679
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ypb02044]
    YPTS_0679
Secretion system [BR:ypb02044]
Type VI secretion system
  Imp/Vas secretion system core components
   YPTS_0679

SSDB

Motif

Pfam:

Other DBs

NCBI-ProteinID:

ACC87663

Position

761081..764575

AA seq 1164 aa
MIRRMLILIIALVLCYIVWWIGPLIAIGPYFPLGGVWVRKIIIALILFWALWPFVAIFFS
WIFRYARAPLPKRKKKTVQLDRVSARFHDAMLTLQHADLSSQKTRWQRWRQRRKRQYIDA
KPWFLVMGPPGCGKTSIVYESSEKFLLSEQYGLAQTTDIGPTQDCNWWLTDRAVYIDTAG
EWILLHGQSEEAGTARQKLFSMIRKYRRYPGVDGIVLCLDVSVLLNSSVTERKSLADTLR
LRILEVASTFQADIAVYLFLNNIDKLPGGETFLSLMNDELLAGGLGISMTHNEKGQNNFV
ADEERYRELLTRVSRYVLEILHDSPNMEMRHQLLLFTESLGALQKPLFGLFEQIFPATPI
GYTGCLRQFWFGSTQNLTSWEALYYPSSTSTFESRPAGQMYFPALSQAITERGVLHATGP
MPLRNRLLNIGKYVFVVLVLCILLLMLSARYFWEYDYIGYATARFEETRRIVRDIPITNQ
VNDNLVAAYEQLGYINTHYLESSPPLLTPYFEHRLLNQAMLQTYHRHLNKVFWPAVQNYV
TNELKKDTQSPDGDNYDTLKVYLMLGQPDHRSQEALVQWFMSRWESFTPQGYGQNDRKLF
SYHLSELFSDTASAAPKVKLNDELIRESRIKAMKTPIHIRVINRIHDAPLPARIEDLSLA
DAAGPSVTLMLRRKSPSTVTDLAIPAFYTRASYHDVVNPQLQEASEAMINEEAWVLSDGK
ASVSQVSLLAAAQKLSDEARKYYLMEYANQWDAFFNDIRVRPINGLDDAALLARQLSDPS
SPLANLVRFSTREITLTTDNNGKGAMSSGWFNIQRNKLTTARRNIIDEMSGERSRFRLTP
EKAVEDRFELLRRLGYALQSASTSNSDPLGRTFEQIYNQLITLSTSLRAGQILPQNNDFS
RLQIDMARQPEPVRSIMMDLLAVGQTQSLQQSKANLSKGVSSIASDLCSNAVSGRYPFNR
LASEEIGIGDFNRMFGRSGAMQSFFDQNLAPYVDTNGNRWKVKPDSNGVVTPKTLRSFEN
SAQIRDTFFDASGKMAMSMIIRPISLTPSILEAVLDVDGQIINYSHGSNQPVKVDWPGPK
GGVYIRLTFKTQDGNVETVSFNGPWAIFRMYDVSNPRPLGVNSRELMMVMDNVSGVFKIE
LSSTMKDYPLWSKALAQFSCPKNL

NT seq 3495 nt +upstreamnt +downstreamnt
atgatacgcagaatgttgattttaatcattgccctagtgctttgttatattgtgtggtgg
atagggccgctgatcgccattggcccctatttccctctggggggggtatgggttcgtaag
atcattattgctctgattttattttgggcactgtggccatttgttgcaattttcttcagt
tggatttttcgttatgcccgtgcgccacttcccaagcgcaagaaaaaaacggttcagctt
gatcgcgtttctgcacgttttcatgatgcgatgctcaccctgcaacatgcggatctttca
agccagaaaacacgctggcagcgctggcgtcaacggcgtaagcgccagtatatcgatgct
aaaccgtggtttctggtcatggggccacccggatgcggtaaaacgtcgatagtttatgag
agtagcgagaagttcctactctcagaacagtatggtttagcgcagaccacggatattgga
ccgacgcaggactgtaattggtggctgacggatcgtgctgtttacatcgatacggcaggg
gaatggatcctgctgcatggtcagagcgaagaagcgggcacggctcggcaaaaattgttc
tctatgatccgcaaatatcgccgttatccgggggttgatgggattgttctttgccttgac
gtcagcgtgcttttgaactcttcggtgacggaacgtaagtcactggctgatacgttgcgc
ctgcggatcctggaagttgcctcgacatttcaggccgatattgcggtgtacttgttcctc
aacaatatcgataagttacctggcggcgaaaccttcctctcgctaatgaacgacgaactt
ctggccggagggcttgggattagcatgacccataatgaaaagggtcagaacaatttcgtt
gccgatgaagaacgttaccgtgaactcctgacacgtgttagccgttatgtgttggaaata
ttgcacgattcgcccaatatggagatgcgccaccaattgctgctgtttacagaaagcctg
ggagcgctacaaaaacccctgtttggcttattcgaacaaatatttccggcgacaccgatt
ggctataccggttgtttgcggcagttctggtttggcagtacccaaaatctgacctcatgg
gaggcgctgtattatccgtcatcgaccagcacctttgaaagccggcctgctgggcagatg
tatttccctgcactgagtcaagcgatcaccgaaaggggggtattacacgccaccggccca
atgcctctgcgaaatcgcctgttaaacatcggtaagtatgtgttcgtggtccttgtgctc
tgcatcttattgttgatgctgagcgcccgctatttttgggaatatgactatattggctat
gcgacagctcggtttgaggaaacccgtcggattgtgcgtgacatcccaatcacgaatcag
gtcaacgataatctggtcgcagcttacgaacagttggggtatatcaacacccattatctg
gaaagttcaccgccactgctgacaccgtacttcgagcaccgtttactgaatcaggcgatg
ttgcaaacctaccatcgtcacctgaataaagtgttctggcctgcggtacaaaactacgtc
accaacgagctgaaaaaggacactcaatctcctgacggtgacaactatgacacgctgaaa
gtttacctgatgctcggacaacctgatcaccgctctcaggaggcattggtgcaatggttt
atgtcgcgctgggaaagttttacgcctcagggatatgggcaaaacgaccgcaaactcttc
agttatcatttgagtgaactgttttctgacaccgcctcagctgccccgaaagttaagctg
aatgatgagctgatccgtgaatcacgcattaaagcgatgaaaacaccgatacacatccgg
gtgattaatcgtattcatgacgccccactgcccgcgaggattgaggatcttagtctggct
gatgccgccggtcctagcgtaacactgatgctgagacgtaaaagccccagtacagtaacg
gatttggcgatcccggctttctacactcgggccagctaccacgatgtggttaacccacaa
cttcaggaagcatcggaagcgatgattaacgaggaagcgtgggtgttgagtgacggtaaa
gcttcggttagtcaggttagtttactggctgctgcgcaaaaactgtccgatgaagcgcgc
aagtattatctgatggagtatgccaaccaatgggatgcattcttcaatgatatcagggtg
cgcccaatcaacggacttgatgatgcggcgctgctggcaaggcaactctcagacccgtca
tccccgttggctaatctggtgcgtttctccacacgtgaaataaccctgaccactgacaac
aatggtaaaggggcgatgtcgtcaggctggttcaatattcaacgtaataagctcacgact
gcccgccgtaacatcattgacgaaatgtcgggtgagcgttctcgttttcgtctaacgcca
gagaaagcggtggaggatcgctttgaactattaagacgtctgggatatgccctgcaaagt
gcgtctaccagcaattctgatccgttgggccgaaccttcgagcagatttataaccagttg
ataacactctcgacttcccttcgggctgggcagattttgccgcaaaataacgatttcagt
cgcttgcaaatcgatatggcccgtcagccagagccggtgcgcagcattatgatggatctg
ctggccgtcggacaaacgcaaagtctgcaacaaagtaaggccaacctcagcaagggcgtc
tcttcaattgcttctgatttatgtagcaacgccgtcagtggccgttatccctttaatcgg
ttggctagcgaagagataggtattggcgatttcaaccgtatgtttggtcgttctggggcg
atgcaaagcttctttgatcagaatctcgcaccgtatgtcgataccaacggcaaccgctgg
aaggtaaaacctgacagtaacggtgtggtgacccctaaaactctgcgttcgtttgaaaac
tcagcacaaatccgcgacaccttctttgatgcctccggcaagatggcgatgtcgatgatc
attcgccctatctcactgactccatcaattttggaagcggttcttgatgtcgatggccag
attattaactacagccatggttctaaccaaccggtaaaagttgattggccaggaccgaaa
ggtggggtgtatatccgcctgacgttcaaaactcaggatggaaatgtggaaaccgttagc
ttcaatggtccgtgggctattttccgcatgtatgacgttagtaaccctaggccactcggg
gtcaatagccgtgaactcatgatggtgatggataacgtgagtggcgtcttcaaaattgag
ttgagttccaccatgaaagattatccgctgtggtcaaaagcattggcacagttctcatgt
cctaagaatctctaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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