KEGG   Yersinia pestis D106004: YPD4_0620
Entry
YPD4_0620         CDS       T01832                                 
Name
(GenBank) sigma-54 transcriptional regulatory protein
  KO
K10943  two-component system, response regulator FlrC
Organism
ypd  Yersinia pestis D106004
Pathway
ypd02020  Two-component system
ypd02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ypd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    YPD4_0620
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    YPD4_0620
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:ypd02022]
    YPD4_0620
   02035 Bacterial motility proteins [BR:ypd02035]
    YPD4_0620
Two-component system [BR:ypd02022]
 Other families
  FlrB-FlrC (polar flagellar synthesis)
   YPD4_0620
Bacterial motility proteins [BR:ypd02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    YPD4_0620
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 AAA_5 HTH_30 AAA_7 DUF4092 AAA MCM HTH_28 AAA_2 nSTAND3 AAA_3 HTH_24
Other DBs
NCBI-ProteinID: ACY57529
Position
767385..768413
AA seq 342 aa
MMNINVDVFPKNDHGFVANAPSSVSVFSLARRVAEFNVPVLVTGETGTGKECVAKYIHQK
AMGDASPYIAVNCAAIPESMLEAILFGYEKGAFTGAIASVAGKFEQANGGTLLLDEIGDM
PLALQVKLLRVLQEQEVERLGGHKPIPLDIRIIASTNKDLSVEIAEGRFRQDLYYRLSVV
PIHILPLRERPEDILPLVKAFINKYQSFLNVKIDITAEAQCELYKYTWPGNVRELENVIQ
RGIIMSNNGVIELPSLGLPMAQGISSPVGETSLPFSTIQPPDGENNIKLRGRLAQYQYIV
DLLQRHQGNKSKTAAFLGITPRALRYRLANMREDGIDIECHS
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgatgaatatcaatgttgatgtttttccaaaaaacgatcatggatttgttgctaatgcg
ccttccagcgtaagtgtattttcccttgcgcgtagggtagctgaatttaatgttccggtg
ttggtcaccggtgaaaccggaaccggtaaagagtgtgtagcgaaatatatccatcagaaa
gccatgggggatgcctcaccctatatcgcggtgaattgtgccgcgatacctgagagcatg
ttggaagccatattatttggttatgagaaaggtgcctttacgggcgctatcgccagtgtt
gcagggaaattcgagcaggcgaatggaggcacattattactggatgaaatcggtgatatg
ccgttggcactgcaagtaaagttattgcgtgtattgcaagagcaagaagttgaacgttta
ggtggtcataagcctattcctttggatattcgtattattgcctcaacaaacaaagatctg
agtgttgaaatcgcggaagggcgttttcgtcaggatctctactaccgcttatccgtggtg
cctatccatatattacctttacgtgaacggccagaggatattctgcctttggtgaaggca
tttattaataagtaccaaagttttctgaatgtaaaaatagatatcaccgcagaagcgcaa
tgtgagctgtataaatacacctggcctggcaatgttcgtgaattagagaatgttattcaa
cgcggtatcatcatgagcaacaacggcgtgattgaactgcccagcctcggtttacctatg
gcacagggaatatcctcgccagtaggggaaacatcattacctttttcaacgattcagccc
cctgatggggaaaacaatattaagttacgtgggcgcttggcgcagtaccaatacattgtg
gatttactgcaacggcatcagggtaataaatctaaaacggccgcatttttaggtattacg
ccacgtgctttgcgatatcggctcgccaatatgcgtgaagatggcatcgacattgagtgt
cactcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system