KEGG   Yersinia pestis D106004: YPD4_1966
Entry
YPD4_1966         CDS       T01832                                 
Symbol
nth
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
ypd  Yersinia pestis D106004
Pathway
ypd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ypd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    YPD4_1966 (nth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ypd03400]
    YPD4_1966 (nth)
Enzymes [BR:ypd01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     YPD4_1966 (nth)
DNA repair and recombination proteins [BR:ypd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     YPD4_1966 (nth)
 Prokaryotic type
     YPD4_1966 (nth)
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5
Other DBs
NCBI-ProteinID: ACY58873
Position
complement(2512634..2513275)
AA seq 213 aa
MNKEKRVTILTRLRDNNPHPTTELVYSTPFELLISVLLSAQATDVSVNKATARLYPVANT
PQAILDLGVDGLKEYIKTIGLYNTKAENVIKTCRILLEKHQGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTGFAPGSNVDQVEEKLLKVVPAEFKLDCHHWLI
LHGRYTCIARKPRCGSCIIEDLCEFKEKVYPEH
NT seq 642 nt   +upstreamnt  +downstreamnt
atgaataaagaaaaacgtgtcactattttgacccgtctgcgggataacaacccacatcca
acgactgaattagtttactcgacgccctttgaactgcttatttctgtgctgctatcggct
caagcaacagatgtcagtgtcaacaaagcgacagcccggctgtaccctgtggccaatacc
ccccaagccatcttggatctgggggttgatggcttaaaggaatatatcaaaaccattggc
ctgtataataccaaagctgaaaatgtcatcaaaacctgccgcattttactggaaaagcat
cagggagaggtgccagaggatcgggcggccttggaagcgttacccggtgtcggtcgtaag
accgccaatgtggtgttaaatacggcatttggctggcccacaattgccgttgatacgcat
atatttcgtgtgtgtaaccgcaccgggtttgctcctggtagcaatgttgatcaggttgag
gaaaaactactcaaagtggtcccggccgaatttaaactagattgtcaccactggctgatt
cttcatgggcgctatacctgtattgcccgaaaaccccgttgcggttcatgcattattgaa
gacttatgcgagtttaaagagaaagtctatccagagcattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system