KEGG   Yersinia pestis D106004: YPD4_3607
Entry
YPD4_3607         CDS       T01832                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
ypd  Yersinia pestis D106004
Pathway
ypd03030  DNA replication
ypd03430  Mismatch repair
ypd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ypd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    YPD4_3607 (dnaN)
   03430 Mismatch repair
    YPD4_3607 (dnaN)
   03440 Homologous recombination
    YPD4_3607 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ypd03032]
    YPD4_3607 (dnaN)
   03400 DNA repair and recombination proteins [BR:ypd03400]
    YPD4_3607 (dnaN)
Enzymes [BR:ypd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     YPD4_3607 (dnaN)
DNA replication proteins [BR:ypd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     YPD4_3607 (dnaN)
DNA repair and recombination proteins [BR:ypd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     YPD4_3607 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta_2 DNA_pol3_beta DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: ACY60509
Position
complement(4604226..4605326)
AA seq 366 aa
MKFIIEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGSLRLTGTDLEMEMVACVALS
QSHEPGATTVPARKFFDIWRGLPEGAEITVALDGDRLLVRSGRSRFSLSTLPAIDFPNLD
DWQSEVEFTLPQATLKRLIESTQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVC
SMPIGQTLPSHSVIVPRKGVMELVRLLDGGDTPLRLQIGSNNIRAHVGDFIFTSKLVDGR
FPDYRRVLPKNPDKMLEAGCDLLKQAFSRAAILSNEKFRGVRLYVSHNQLKITANNPEQE
EAEEILDVSYEGTEMEIGFNVSYVLDVLNALKCEDVRLLLTDSVSSVQIEDSASQAAAYV
VMPMRL
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgaaatttatcattgaacgtgagcatctgctaaaaccactgcaacaggtcagtagcccg
ctgggtggacgccctacgttgcctattttgggtaacttgttgctgcaagtcacggaaggc
tctttgcggctgaccggtaccgacttggagatggagatggtggcttgtgttgccttgtct
cagtcccatgagccgggtgctaccacagtacccgcacggaagttttttgatatctggcgt
ggtttacccgaaggggcggaaattacggtagcgttggatggtgatcgcctgctagtgcgc
tctggtcgcagccgtttctcgctgtctaccttgcctgcgattgacttccctaatctggat
gactggcagagtgaggttgaattcactttaccgcaggctacgttaaagcgtctgattgag
tccactcagttttcgatggcccatcaggatgtccgttattatttgaacggcatgctgttt
gagaccgaaggcgaagagttacgtactgtggcgaccgatgggcatcgcttggctgtatgc
tcaatgcctattggccagacgttaccctcacattcggtgatcgtgccgcgtaaaggtgtg
atggagctggttcggttgctggatggtggtgatacccccttgcggctgcaaattggcagt
aataatattcgtgctcatgtgggcgattttattttcacatctaagctggttgatggccgt
ttcccggattatcgccgcgtattgccgaagaatcctgataaaatgctggaagccggttgc
gatttactgaaacaggcattttcgcgtgcggcaattctgtcaaatgagaagttccgtggt
gttcggctctatgtcagccacaatcaactcaaaatcactgctaataatcctgaacaggaa
gaagcagaagagatcctcgatgttagctacgaggggacagaaatggagatcggtttcaac
gtcagctatgtgcttgatgtgctaaatgcactgaagtgcgaagatgtgcgcctgttattg
actgactctgtatccagtgtgcagattgaagacagcgccagccaagctgcagcctatgtc
gtcatgccaatgcgtttgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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