KEGG   Yersinia pestis Angola: YpAngola_A2340
Entry
YpAngola_A2340    CDS       T00635                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
ypg  Yersinia pestis Angola
Pathway
ypg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ypg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    YpAngola_A2340 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ypg03400]
    YpAngola_A2340 (xth)
Enzymes [BR:ypg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     YpAngola_A2340 (xth)
DNA repair and recombination proteins [BR:ypg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     YpAngola_A2340 (xth)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_3
Other DBs
NCBI-ProteinID: ABX87423
Position
2453733..2454539
AA seq 268 aa
MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQHGYHVFYHGQK
GHYGVALLTKEQPLAVRRGFPSDEEDAQRRIIMADLATPQGTLTVINGYFPQGESRDHPI
KFPAKARFYADLQRYLEEQLSPEAQVLIMGDLNISPTDLDIGIGEDNRKRWLRTGKCSFL
PEEREWLERLQNWGLVDTFRAANPDCNDHFSWFDYRSRGFDENRGLRIDLLLASQPLAAR
CIATGIDYAIRGMEKPSDHAPVWSEFSL
NT seq 807 nt   +upstreamnt  +downstreamnt
atgaagttcgtttcttttaatatcaatggcctacgtgctcgtcctcatcaattagccgca
ataattgagcagcatcaaccggatgtgatcggcctacaagaaactaaggtacatgatgat
atgtttcctcttgaagacgtcagccagcatggttaccacgttttttaccatgggcaaaaa
ggtcattacggtgttgcactattgacgaaagaacagccactggctgtgcgccgaggtttc
ccaagcgatgaagaagatgcacagcgccgtattatcatggccgacttagccaccccgcaa
ggcaccttaacggtaatcaatggttattttcctcagggagaaagtcgtgaccatccaata
aagttccccgctaaagcgcgcttttatgctgacctgcaacgctatcttgaggagcaactc
tcccctgaggcccaggtacttatcatgggggacttgaatatcagtccaaccgatttagat
atcggtattggtgaagataaccgtaaacgctggctgcgcacaggcaaatgctcgttctta
ccagaagaacgagagtggctggaacgtctgcaaaactgggggttggttgatactttccgc
gcggctaatcctgattgtaatgaccatttttcatggtttgattaccgttcccgtggtttt
gatgaaaacagaggccttcgcatcgatttattgctggccagtcaaccactggcggctcgt
tgtattgctacgggtattgattatgcaatccgtgggatggaaaaaccatcagaccacgcg
ccggtttggtccgaattctcactttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system