KEGG   Yersinia pestis Harbin 35 (biovar Medievalis): YPC_0568
Entry
YPC_0568          CDS       T01874                                 
Symbol
rrmJ
Name
(GenBank) 23S rRNA methyltransferase
  KO
K02427  23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
Organism
yph  Yersinia pestis Harbin 35 (biovar Medievalis)
Brite
KEGG Orthology (KO) [BR:yph00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:yph03009]
    YPC_0568 (rrmJ)
Enzymes [BR:yph01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.166  23S rRNA (uridine2552-2'-O)-methyltransferase
     YPC_0568 (rrmJ)
Ribosome biogenesis [BR:yph03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    YPC_0568 (rrmJ)
SSDB
Motif
Pfam: FtsJ Methyltransf_23 Methyltransf_31 Reovirus_L2_MT1 Methyltr_RsmB-F
Other DBs
NCBI-ProteinID: ADV97277
Position
complement(558399..559028)
AA seq 209 aa
MSNKKRSASSSRWLQEHFSDKYVIQAQKKGLRSRAWFKLDEIQQSDKLFKQGMTVVDLGA
APGGWSQYAVTQIGSKGRVIACDLLPMDPIVGVDFLQGDFRDELVLKALLERVGDKKVQV
VMCDMAPNMSGTPAVDIPKSMYLVELALDMCRDVLAPGGSFLVKVFQGDGFDEYLREIRS
LFTKVKIRKPDASRARSREVYIVATGRKL
NT seq 630 nt   +upstreamnt  +downstreamnt
atgtctaataaaaagcgttcggctagctccagtcgctggttacaagaacactttagcgat
aaatatgtaattcaggcacagaaaaaggggctacgctctcgtgcctggtttaaacttgat
gaaatacaacagagcgataaactttttaaacagggtatgacagttgttgacctaggtgca
gcccctggtggttggtcccaatatgctgtaacccagattggcagtaaagggcgagttatc
gcatgtgatcttctaccaatggatcctatcgttggtgtcgatttccttcagggcgatttt
cgtgatgaactggtcctgaaagctttacttgagcgcgttggggataaaaaagttcaggtg
gtcatgtgtgatatggccccgaatatgagtggtactccggcagtcgatatacctaaatca
atgtatctggttgaattagctttagatatgtgtcgtgatgtacttgcaccaggtggaagt
ttcctggtgaaggtgttccagggagatggctttgatgaatacctacgggaaattcgctcc
ctgtttacgaaagttaagattcgtaagccagacgcttctcgtgcgcgatcgcgtgaagta
tacattgtagcgacagggcggaaactgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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