KEGG   Yersinia pestis Harbin 35 (biovar Medievalis): YPC_3524
Entry
YPC_3524          CDS       T01874                                 
Symbol
dinB
Name
(GenBank) DNA polymerase IV
  KO
K02346  DNA polymerase IV [EC:2.7.7.7]
Organism
yph  Yersinia pestis Harbin 35 (biovar Medievalis)
Brite
KEGG Orthology (KO) [BR:yph00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yph03400]
    YPC_3524 (dinB)
Enzymes [BR:yph01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     YPC_3524 (dinB)
DNA repair and recombination proteins [BR:yph03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    YPC_3524 (dinB)
SSDB
Motif
Pfam: IMS IMS_C IMS_HHH DNA_pol_lambd_f POLH-Rev1_HhH HHH_5 Cdd1 Clr5
Other DBs
NCBI-ProteinID: ADV99990
Position
complement(3389089..3390147)
AA seq 352 aa
MRKIIHVDMDCFFAAVEMRDDPRLRDIPFAIGGSKERRGVISTANYPARRYGVRSAMPTA
MAFKLCPQLTLLPGRMAAYKEASQHIREIFARYTPLIEPLSLDEAYLDVSDSLACGGSAT
LIAQEIRQSIASELNLTASAGIAPIKFLAKIASELNKPNGQYVITPNQIQPFLQDLPLSK
IPGVGAVTAKRLQALGLVTCGDIQKYPLAELLKHFGKFGRVLWERSHGIDEREISPDRLR
KSVGVEKTLAEDIYDWESCEALIEELYLELETRLRKVKPSLHIARQGVKLKFHDFQQTTQ
EHTWPVLNKVDLLEIAHAAWHERRAERGVRLVGLHVTLLDPQLERQLLLDWG
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgcgaaaaattattcatgtcgatatggattgcttcttcgcggcagtagaaatgcgcgac
gaccctcgcctgcgtgatatcccctttgcgattggtggcagtaaggagcggcgtggcgtg
atcagtaccgctaattatcccgctcggcgttatggtgttcgcagcgctatgccaacggcg
atggcgtttaaactctgcccacagttaacattgctgcctggtagaatggcggcttataaa
gaggcctcgcagcatattcgcgaaatttttgcccgttatactccattgattgaaccactg
tcattggatgaggcctatttggatgtttctgatagcttggcgtgcggtggctctgcaaca
ttaatcgctcaagagatccgccagtctatcgctagtgagctgaacctgacagcctccgcg
gggattgccccgataaaatttcttgccaaaatcgcctcagagctgaataaacctaatggc
cagtatgtgattacaccgaatcagatccagcccttcctacaggatttaccgctgagtaaa
attcccggtgttggtgccgtcaccgccaaacgtttacaggcgctggggttggtaacctgt
ggcgatatacaaaaatatccattggcagagttgttaaaacattttggtaagtttggtcgc
gtattgtgggagcgtagtcacggtattgatgaacgtgaaatatccccagatcgtctacgt
aaatccgttggtgtggagaaaacactggccgaggatatttatgactgggaaagttgtgag
gcgttgatcgaagaactttatcttgaactggaaactcgtttacgtaaggtaaagccgagc
ctacacattgcccggcagggcgttaagctaaaatttcatgattttcagcagaccacgcaa
gaacacacatggccagtattgaataaagtagatttactggagattgcccacgccgcatgg
catgaacggcgggccgagcggggagtccgtttggtcgggctgcatgttacgttgctggat
ccacaacttgagcggcaattattgcttgattggggctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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