KEGG   Yersinia pestis Harbin 35 (biovar Medievalis): YPC_3821
Entry
YPC_3821          CDS       T01874                                 
Name
(GenBank) multidrug efflux protein
  KO
K18138  multidrug efflux pump
Organism
yph  Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph01501  beta-Lactam resistance
yph01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:yph00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    YPC_3821
   01503 Cationic antimicrobial peptide (CAMP) resistance
    YPC_3821
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:yph02000]
    YPC_3821
   01504 Antimicrobial resistance genes [BR:yph01504]
    YPC_3821
Transporters [BR:yph02000]
 Other transporters
  Electrochemical potential-driven transporters [TC:2]
   YPC_3821
Antimicrobial resistance genes [BR:yph01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    YPC_3821
SSDB
Motif
Pfam: ACR_tran MMPL SecD_SecF Patched DUF4232 Mfp-3
Other DBs
NCBI-ProteinID: ADW00259
Position
complement(3678590..3681715)
AA seq 1041 aa
MFARFFIYRPVFAWVIAIVIMLGGVVALETLPIAQYPDVAPPSISIKATYTGASAETLEN
SVTQVIEQELTGLDGLLYFSSSSGSDGNAKIVATFKQGTNADTAQVQVQNKVQQALTRLP
TEVQAQGVTVTKSQTNFLLIMSLYDEKDKHTGTDIADYLVSNLQDPLARLEGVGSVQVFG
SQYAMRIWLNPTKLAAYNLMPSDVQSAITAQNTQVSAGKIGALPSGKEQQLTATVMAQSR
LKTPEQFNNIIVKSDSTGAVVRLRDVARVELGNEDYSVTTRLNGHPAAGIAVMLAPGANA
LATAERVKAKAAEFELNLPDGYKIAYPKDSTDFIKVSVEEVVKTLIEAILLVVIVMYIFL
QNIRATLIPAIAVPVVLLGTFGVLAIFGYSINTLTLFGMVLSIGLLVDDAIVVVENVERV
MREDNLPPREATEKSMSEIASALIGIALVLSAVFLPMAFFGGATGVIYRQFSITIVSAMA
LSVLVALTLTPALCATFLKPNHKPPSEHGFFGGFNRRYDRMQTRYESLVGHVIHRSLRYL
LIYAVLIGVMCVLFIRLPTGFLPTEDQGDVMVQYTLPAGATSGRTMEVSKAVENYFMTQE
KDNTKAVFTISGFGFSGSGQNAGMAFIALKHWRDRPGSENTATAIADRAMKALSSIRDAQ
IFSMTPPAVDGLGQSNGFTFELQATGDTSREQLLTLRDQLISKANKDPILASVRANTLQQ
MPQLQVDIDNDKVAALGLSISDVNATLSAAWGGTYINDFIDRGRVKKVYMQGDVDTRSKP
EDLNQWFVRGSSDAMTSFSAFATTRWIYGPETLSRYNGQTSYEIQGQAASGSSSGTAMDQ
MEKLAAELPGTSYAWSGLSYQERLASGQALSLYAISILVVFLCLAALYESWSVPFSVMMV
IPLGIIGAVAAATLRGLENDIYFQVALLTTLGLASKNAILIVEFAEAAYLRGEPLVVAAL
QGAATRLRPILMTSLAFIAGVMPLAMSTGAGANSRISIGSGIIGGTLTATVLAVFFVPLF
FVLIRRVFSGKSKNITEHKGV
NT seq 3126 nt   +upstreamnt  +downstreamnt
atgtttgcccgtttctttatttatcgcccggtttttgcctgggtcattgccattgttatt
atgttgggcggggtggttgcgctggaaaccttgccgatagcccagtatcccgatgtcgca
ccaccatctatttccattaaagccacctataccggtgcttcagcagaaacactcgaaaac
agtgtgacgcaggtcattgagcaagaactgaccggattggatggtctgctctatttttcc
tcctccagcggttccgatggtaatgccaagatcgtcgccacatttaagcaggggactaat
gctgataccgcgcaggtacaggtgcaaaataaggttcagcaggcgctaacccgtttgcca
acagaggtgcaggcgcaaggggtcacggtgaccaagtcgcagactaacttcttgttgatc
atgtcgctgtatgatgaaaaagacaaacacaccggaacggatattgccgactatctggtc
agcaacctgcaagacccactggctcgcctcgaaggggtagggagtgtgcaggtgtttggt
tcgcaatatgcgatgcggatttggttaaatccgaccaaactggccgcttacaatctgatg
cccagcgatgttcaatccgccattacggcacagaacacacaggtttctgctggcaaaatc
ggggcgttaccgagcggtaaagagcagcaattgaccgcgacagtcatggcgcaatcccgc
ctgaaaacaccggagcagttcaacaatattattgttaaaagtgacagcacgggcgcggtg
gtacgactgcgcgatgtggcccgtgttgagctgggcaatgaagattacagcgtgacgacc
cgcttgaacggccatccagccgcggggatcgcggtgatgctggcacctggtgctaatgcg
ctggcgaccgccgagcgggtaaaggccaaggctgccgagtttgaattgaacttgcctgac
ggatacaaaatcgcgtatccaaaagacagcactgattttattaaagtttcggtcgaggaa
gtggtgaaaacgctgatcgaagccatcttgctggtggttatcgtgatgtacatcttccta
caaaatatccgtgccactttgataccggctattgccgtcccagttgtgttgttagggacg
tttggggtgttggccatattcggctactcaatcaatacactgacactttttggtatggtg
ctgtcgatcggcttgttggtcgacgatgctattgtcgtggtggaaaacgttgagcgggtg
atgcgggaagacaatctcccgccccgtgaagcgactgagaaatctatgagtgagatcgcc
agcgcactgattgggattgcactggtgctctcggcagtattcctgcccatggccttcttt
ggtggggcgaccggcgttatctaccgccagttctccatcaccattgtgtcagcgatggcg
ctatccgtgttggtcgcattaaccctcacgccagcattgtgcgccaccttcctgaaaccc
aaccataaaccgccatcagagcacggtttcttcggcgggttcaaccgtcgctatgaccgg
atgcagacccgttatgaaagcctggtagggcatgttattcaccgctctttgcgctattta
ctgatttacgccgtgctgattggggtgatgtgtgtgttgtttattcgcctgccaacgggc
tttttaccgaccgaagatcagggtgatgtcatggtgcaatataccttgccagcaggggca
accagtgggcgcaccatggaggtcagtaaggcggtagaaaactatttcatgacgcaggaa
aaggacaataccaaagcggtcttcactatctccggttttggctttagtggtagcgggcaa
aatgccggtatggcgtttattgcattgaaacactggcgtgaccggccgggcagtgaaaat
accgccacagccattgcagatcgcgcgatgaaggcactgtcgagtattcgcgatgcccaa
attttcagtatgacgccacctgcggtggatgggttaggccagtcgaatggctttactttt
gagttgcaagccacaggggataccagccgcgagcaactgctgaccttgcgcgatcaactg
attagcaaggcgaataaagaccctattttggcctcagttcgcgccaataccttgcaacaa
atgccgcagttacaagtagatatcgataacgataaagtcgcggcattagggctgtcgatc
agtgatgtgaatgccacattaagtgccgcctggggtgggacgtatatcaatgactttatt
gatcgtgggagagtgaaaaaagtgtatatgcagggtgatgtggatacccgctctaaaccg
gaggatctcaaccaatggttcgtgcgcggtagcagtgatgccatgacatcgttttctgcc
tttgcgacaactcgctggatttacggcccggaaacgctttcccgctataacgggcagacg
tcctatgaaattcaggggcaggccgcttccggcagcagttcgggcaccgcaatggatcaa
atggagaaactggcggctgaattacctggcaccagttatgcgtggagcgggctgtcttat
caggagcgtttagccagcgggcaagcattatcgctgtatgccatttcaatcttggtggta
ttcctgtgcttggcggcgttgtatgagagttggtcagtcccgttctcggtcatgatggtt
attccgttggggataatcggtgcagtagcggcagcgacgctgcggggattggaaaatgat
atttacttccaggtggcgttgttgacgaccctgggtctggcatcgaaaaacgccattctg
attgttgaatttgccgaagcggcctatttacgcggcgaaccgctggtggtggcggcgttg
cagggcgctgcaactcgcttacggcctatcctgatgacatcgctggcatttattgctggg
gtaatgcctctggcaatgtctaccggtgccggtgctaacagccgcatttcaatcggcagc
ggcattattggcggcaccttaacggcgacagtgttggccgtcttttttgtcccgctcttt
tttgtcttgattcgtcgagtgttcagcggcaagtcaaaaaatatcactgaacataaagga
gtataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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