KEGG   Yersinia pestis Harbin35: CH55_3013
Entry
CH55_3013         CDS       T03717                                 
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ypj  Yersinia pestis Harbin35
Pathway
ypj03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ypj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CH55_3013 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ypj03400]
    CH55_3013 (mutM)
Enzymes [BR:ypj01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     CH55_3013 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CH55_3013 (mutM)
DNA repair and recombination proteins [BR:ypj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CH55_3013 (mutM)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS zinc-ribbons_6
Other DBs
NCBI-ProteinID: AJK08128
UniProt: A0A3G5L8X8
Position
3268086..3268895
AA seq 269 aa
MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILTLSDQPVLSVQRRAKYLL
LELPKGWIIIHLGMSGSLRVLSEETAAEKHDHVDLVVSNGKILRYTDPRRFGAWLWAKDL
ETSNVLAHLGPEPLSDEFTAQYLFDKSRNKRTLIKPWLMDNKVVVGVGNIYASESLFAAG
ILPDRAAGSLTDAESVLLVATIKAVLLHSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRA
GEPCRQCGHPIEIAKHGQRSTFFCRHCQH
NT seq 810 nt   +upstreamnt  +downstreamnt
gtgcctgaattaccagaagttgaaaccagccgacgcgggatcgaaccttatcttgtcggc
cagacaatcctttatgctgtggtcagaaatgcccgtttacgctggccggtatccgatgaa
attctaacacttagcgatcaacccgtactgagtgtccaacgccgggcgaagtatttactg
ctagagctgcctaaaggctggatcatcatacatttaggtatgtcaggtagcctgcgcgta
ttatctgaagagactgcagctgaaaagcacgatcatgtcgatttggtggtcagtaacgga
aaaatattgcgttataccgacccacgacgttttggtgcctggttgtgggcgaaagacctt
gagaccagtaatgtattagcccatttagggccagaaccactaagtgatgaatttactgcg
caatatctgttcgataaatcacgtaataaacgcacattgattaaaccgtggttgatggat
aacaaagtggtcgtcggagtgggtaacatttatgcgagcgaatcactgtttgctgctggg
attttgccagatcgtgccgcaggctcattgactgacgctgaatccgtattgctggtagca
acgataaaagccgtgttattgcattcgattgagcagggcggcaccacattacgtgatttt
ctgcagtcggatggtaaaccagggtatttcgcgcaagagttgcaggtctatgggcgtgcg
ggtgaaccatgtcggcagtgtgggcatcccattgaaatagcgaaacacgggcagcgcagc
acgttcttttgccgccactgccagcattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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