KEGG   Yersinia pestis Harbin35: CH55_326
Entry
CH55_326          CDS       T03717                                 
Symbol
rnb
Name
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
ypj  Yersinia pestis Harbin35
Brite
KEGG Orthology (KO) [BR:ypj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ypj03016]
    CH55_326 (rnb)
Enzymes [BR:ypj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     CH55_326 (rnb)
Transfer RNA biogenesis [BR:ypj03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    CH55_326 (rnb)
SSDB
Motif
Pfam: RNB OB_RNB S1 CSD2 CFSR
Other DBs
NCBI-ProteinID: AJK07574
UniProt: A0A3G5L4I5
Position
complement(364545..366479)
AA seq 644 aa
MFQDNPLLAQLKQQLHTQTPRVEGVVKGTEKGFGFLEVDGQKSYFIPPPQMKKVMHGDRI
IATLHTDKDREIAEPETLVEPFLSRFVGRVQRKDDRLSIVPDHPLLRDAIQCRPVRELTH
SFQNGDWAVAEMCRHPLKGDRAFQADLTAFITNGEDHFVPWWVTLARHNLEREAPAMVES
ALNDAELEREDLTALNFVTIDSASTEDMDDALFVQDNGDGSWLLTIAIADPTAYVVENSE
LDLTARKRAFTNYLPGFNIPMLPRDLSDNLCSLRPNERRPVLVCRVTITEEGTLSNDIRF
SAAWVESKAKLVYDDVSDWLEGNNRWQPQDTAIAEQITLLKRICDARSNWRQQHALVFKD
RPDYRFLLGEKGEVLDIIVEHRRIANRIVEECMIAANVCAALALREHLGFGIYNVHTGFD
PALVEQAASVLKANGVGADPQALLTLPGFCELRRHLDALPTQFLDSRIRRFQTFAEISTV
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAMITGQQAEKPQEEITVQLAERRRLNRM
AERDVGDWLYARYLQPQAGTDTRFTAEIIDITRGGLRVRLLDNGAVAFIPAPFIHAVRDE
VVCSQETGTVQIKGETVYSQSDKIEVRIAEVRMETRNVIARPVA
NT seq 1935 nt   +upstreamnt  +downstreamnt
atgtttcaagataacccgctgctggcgcagctaaaacagcaacttcacactcagacccca
cgcgttgaaggcgtcgttaaaggtactgagaaaggctttggctttcttgaggtagatggg
cagaaaagttactttattccgcctccgcagatgaagaaggtcatgcacggcgatcgcatt
attgccaccctgcatacggataaggatcgtgaaattgctgaacctgaaacattggttgag
ccatttttatcccgctttgttggccgggtgcaacgaaaagatgatcgtctgtctatcgtg
cccgaccaccctttattacgtgatgctattcaatgccgcccagtacgtgaactgacgcat
agcttccaaaacggtgattgggcagtggctgagatgtgccgccacccattaaaaggcgac
cgcgcctttcaggctgacctaaccgcgtttattaccaatggtgaagaccacttcgttcct
tggtgggtaacactggctcgccataaccttgagcgtgaagcccctgctatggtcgaatcg
gccttaaatgacgccgagcttgagcgtgaagacttaaccgcacttaattttgtcactatc
gacagcgccagcactgaagacatggatgatgcgctgtttgtccaagacaatggcgacggt
tcatggttattgaccattgccattgcagacccaacagcttacgtcgtcgaaaacagtgaa
ttggatttaaccgcccgtaagcgtgcttttaccaattatctgccgggttttaacatcccg
atgcttccgcgtgatttgtccgacaacctctgttcactgcgcccaaatgaacgtcgccca
gtattggtttgccgtgtgacgatcacagaagaagggacgctaagtaacgatattcgtttc
tccgctgcttgggttgaatcaaaagccaaactggtttacgacgatgtctctgactggttg
gaaggaaataatcgctggcagccgcaagataccgctattgcagagcagattacgttactg
aaacgtatctgtgacgcccgtagcaactggcgtcaacaacatgcgctggtctttaaagac
cgcccagactatcgcttcctgttgggtgaaaaaggcgaagtgctggatatcattgttgag
catcgtcgtatcgccaaccgcattgtagaagagtgtatgattgcggcgaacgtctgtgcg
gcattggcgttacgggaacacctcggttttggtatttataacgtgcataccggttttgac
ccggcattagtcgaacaagcggctagcgtattgaaagccaatggtgttggtgccgatcct
caagccctgctgacgttacccggtttctgtgagttacgccgtcaccttgatgccctgcca
acacagttcctcgacagccgtattcgccgtttccagacatttgctgaaattagtactgtc
cccggtccgcattttggcttggggcttgaagcctatgccacctggacatctccaatccgt
aaatacggcgacatggtcaatcatcgcctgctgaaagcgatgattactggtcaacaagca
gaaaaaccacaagaagagatcacggtccaattggctgaacgtcgccgcctgaatcgcatg
gctgaacgtgatgtcggtgattggttgtatgcccgttatctgcaaccacaagcaggaact
gacactcgtttcacggcagagattattgatatcacccgcggtggcttgcgtgtgcgttta
ctggataacggtgccgttgcctttattcctgcgccgtttattcacgcggtgcgtgatgaa
gtggtctgcagccaggaaaccggtactgtgcagatcaaaggcgaaacagtttatagccaa
agtgacaaaatcgaggtacgtattgcggaagttcgcatggaaacccgtaatgtcattgct
cgcccagtagcttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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