KEGG   Yersinia pestis KIM10+ (biovar Mediaevalis): y0459
Entry
y0459             CDS       T00092                                 
Symbol
hemB
Name
(GenBank) 5-aminolevulinate dehydratase
  KO
K01698  porphobilinogen synthase [EC:4.2.1.24]
Organism
ypk  Yersinia pestis KIM10+ (biovar Mediaevalis)
Pathway
ypk00860  Porphyrin metabolism
ypk01100  Metabolic pathways
ypk01110  Biosynthesis of secondary metabolites
ypk01120  Microbial metabolism in diverse environments
ypk01240  Biosynthesis of cofactors
Module
ypk_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
ypk_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:ypk00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    y0459 (hemB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ypk04147]
    y0459 (hemB)
Enzymes [BR:ypk01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.24  porphobilinogen synthase
     y0459 (hemB)
Exosome [BR:ypk04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   y0459 (hemB)
SSDB
Motif
Pfam: ALAD
Other DBs
NCBI-ProteinID: AAM84048
UniProt: A0A3G5LG08
Position
509248..510270
AA seq 340 aa
MSYAFPGTFPGRRMRRVRCHDFSRRLVAENHLTVNDLIYPVFVMEGTHQQQAVSSMPGVS
RMTIDLLLKEAEAIAKLGVPVISLFPVIEAGKKSLYAEEAYNPDGLVQRTVRALKDAVPE
LGILTDVALDPYTTHGQDGVIDSDGYVINDVTKEILVRQALSHAEAGAEIIAPSDMMDGR
IGAIRDQLERQGLVNTQIMAYSAKYASCYYGPFRDAIGSSSNLKGGDKKTYQMDPANSDE
ALQEIAQDLQEGADMVMVKPGMPYLDVVRRVKDTFGVPTFAYQVSGEYAMHMAAIQNGWL
QEKPTVMESLLCFKRAGADGVLTYFAKQVAQWLHDDQMQR
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgagctatgcatttccgggcacctttcctggtcgccgtatgcgccgtgtacgctgtcat
gatttcagccgccgtttggttgccgagaatcacttgacggtcaatgacttgatttacccg
gtgtttgtcatggaagggactcaccagcaacaagccgtttcttcaatgccgggggtctct
cgtatgacaattgatctgctgctgaaagaagcagaagcaattgctaagctcggtgtgccg
gttatatcgctattcccggtcattgaagcagggaaaaaatcattatatgcagaagaggca
tataacccggatggtttagttcagcgtactgtgcgtgcgttgaaagatgcagttcctgag
ctaggtattctgactgacgtggcactcgatccctatacgacccatggtcaagatggtgtg
attgattctgatggttacgtgatcaatgatgtcaccaaagagattctagtgcgtcaggca
ctatcgcatgctgaagctggcgctgagattattgcaccaagcgatatgatggatggccgt
ataggtgcaattcgtgatcaattagagcgccaagggttagtgaacacccagataatggct
tattcggctaagtatgcgtcttgctactatggcccattccgcgatgcaattggctcgagc
agtaatctaaaagggggggataaaaaaacttatcagatggatcccgccaacagtgatgaa
gcactgcaagaaatagctcaagatttacaagaaggcgctgatatggtgatggtaaaacca
ggaatgccatatctggatgttgtacgcagggtgaaagatacttttggtgttccaaccttt
gcctatcaggtgtctggtgaatatgccatgcatatggcagcgattcagaatggctggctc
caagagaaaccgacggtgatggagtcgttgttatgctttaagcgtgcaggtgcggatggc
gtattaacttatttcgcaaagcaagttgcgcaatggctacatgatgaccagatgcagcgc
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (9)   
   KEGG PATHWAY (5)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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