KEGG   Yersinia pestis KIM10+ (biovar Mediaevalis): y1182
Entry
y1182             CDS       T00092                                 
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
ypk  Yersinia pestis KIM10+ (biovar Mediaevalis)
Pathway
ypk03030  DNA replication
ypk03430  Mismatch repair
ypk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ypk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    y1182 (holA)
   03430 Mismatch repair
    y1182 (holA)
   03440 Homologous recombination
    y1182 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ypk03032]
    y1182 (holA)
   03400 DNA repair and recombination proteins [BR:ypk03400]
    y1182 (holA)
Enzymes [BR:ypk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     y1182 (holA)
DNA replication proteins [BR:ypk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     y1182 (holA)
DNA repair and recombination proteins [BR:ypk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     y1182 (holA)
SSDB
Motif
Pfam: DNA_pol3_delt_C DNA_pol3_delta DNA_pol3_delta_C
Other DBs
NCBI-ProteinID: AAM84759
UniProt: A0A3G5L948
Position
complement(1325376..1326410)
AA seq 344 aa
MIRIYPEQLVAQLHEGLRACYLLCGNEPLLLQESQDHIRRVASQHDFTEHFSFALDAHTE
WEHIFSLCQALSLFASRQTLLLSFPDSGLTAPISEQLVKLSGLLHPDILLILRANKLTKA
QENSAWFKALSKNGVFVSCQTPEQAQLPRWVSARAKSLNLNVDDAAIQLLCYCYEGNLLA
LSQALERLSLLYPDGKLTLPKVEQAVNDAAHFTPYHWLDALLMGKSKRAWHILQQLQQED
SEPVILLRTVQRELLLLLALKRQMEQVPLRALFDQHKIWQNRRPMMTQALQRLSLQQLQQ
AVHLLTQMEIRLKQDYGQSIWPELETLSMLMCGKTLPESFFDAH
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgatccggatttaccctgaacaacttgtcgcgcagctccatgaggggctacgcgcttgt
tatctattgtgtggcaatgaacccttgttgctacaggaaagtcaggaccacattcgtcgg
gtggcatcgcagcacgatttcactgagcatttcagctttgcgttggacgcgcacaccgaa
tgggagcatatttttagcctttgccaggcactgagtttgttcgccagccgccagacactg
ctgctgagtttcccagacagtgggctgaccgcgccaattagcgagcagttggttaaatta
tctggcctgttacacccagacattttattgatattgcgggcgaataagttgaccaaagcg
caagagaacagcgcctggtttaaagctctcagtaaaaatggggtatttgtcagttgccag
acaccagaacaggcccagcttccccgctgggtgagcgctcgcgccaagagcctcaacttg
aacgtagacgatgccgccattcaattactttgctactgctatgaaggtaacttgctggcc
ttatctcaggcgttagaacggctctcgctgctctaccccgacggtaagttaaccctgcct
aaagtagaacaagccgtcaacgacgctgcgcatttcacaccataccattggcttgatgcc
ttgttgatggggaagagcaagcgggcttggcatattttgcagcaattacagcaagaagac
agtgaacccgttattttactgcgtaccgtacaacgtgaactgctcctgctgttagcgctc
aaacgtcagatggaacaagttccattgcgcgcattattcgatcaacacaaaatttggcag
aaccggcggcccatgatgactcaggcactgcaacggctctcccttcagcaactgcaacag
gcggttcatctgctcacacagatggaaatccggctgaaacaggattatggtcaatcaatc
tggcctgagttagaaacgctatctatgctgatgtgtggaaaaacattacctgagagcttt
tttgatgcccattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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