KEGG   Yersinia pestis KIM10+ (biovar Mediaevalis): y3656
Entry
y3656             CDS       T00092                                 
Symbol
hepA
Name
(GenBank) probable ATP-dependent RNA helicase
  KO
K03580  ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ypk  Yersinia pestis KIM10+ (biovar Mediaevalis)
Brite
KEGG Orthology (KO) [BR:ypk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ypk03021]
    y3656 (hepA)
Transcription machinery [BR:ypk03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     y3656 (hepA)
SSDB
Motif
Pfam: RapA_C Tudor_RapA Tudor_1_RapA SNF2-rel_dom Helicase_C ResIII DEAD AAA_34 Flavi_DEAD
Other DBs
NCBI-ProteinID: AAM87204
UniProt: Q8ZII0
Position
4058750..4061656
AA seq 968 aa
MPFTLGQRWISDTESELGLGTVVAIDVRMITLLFPATGENRLYARNDSPITRVMFNPSDT
ITHHEGWQLKVEEVTQENGLITYIGTRLDTEETGVAMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRFRARKYQSEQFRLPWSGLRGIRASLIPHQLHIAYEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLAGRAERVLIVVPESLQHQWLVEMLRRFNLRFSLFDDSRYSEALL
DSSNPFDTEQMVICSLDFVRRNKQRLEQLADASWDLLVVDEAHHMAWSEEAPSREYQVIE
QLAEHIPGVLLLTATPEQLGQQSHFARLRLLDPDRFHDYEEFVNEQQKYRPIADAVTLLL
GGERLTDDKLNLLGELIDEQDIEPLLKAANSQSEDSEAARQELVTMLMDRHGTSRVLFRN
TRNGVKGFPHRVLHQIKLPLPTQYQTAIKVSGIMGAKKTLDARAKDMLYPEQIYQEFEGE
NATWWNFDPRVEWLLNYLVANRGEKVLVICAQAATALQLEQVLREREAIRAAVFHEGLSL
IERDRAAAYFASEEDGAQVLLCSEIGSEGRNFQFACQLVMFDLPFNPDLLEQRIGRLDRI
GQNREIQIMVPYLEDTAQAILVRWYHEGLDAFEHTCPTGRTIYDSSYQELISYLATPSEQ
EGLDEFIHTCRQQHEGLKLQLEQGRDRLLEMHSNGGEHGQELAQSIAEQDNDINLVSFAL
NLFDIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPPDGCTVTFDREQALSREDAQFVSWE
HPIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKHLQLTRFLPPTP
VRMLMDRNGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQQEVHTMLQQAEALVEAQAQ
ALIETAKREADDKLSTELARLEALKAVNPNIRDDEIEALEHNRKMVLENLNQAGWRLDAI
RLVVVTHQ
NT seq 2907 nt   +upstreamnt  +downstreamnt
atgccttttacacttggtcaacgctggatcagcgacacagaaagcgaacttggattgggt
actgtcgttgccattgacgtgcgcatgatcaccttactgttccctgcaaccggtgaaaac
cgcctttacgccagaaatgactcgccaatcacccgggtcatgttcaatccgagcgatacc
atcactcaccacgaaggctggcagctgaaagtggaagaagtgactcaagaaaatgggctg
attacctatatcggtacccgtttggatactgaggaaaccggcgtcgccatgcgtgaagtt
ttgctcgatagcaaactgacttttagtaaaccacaggatcgcttattcgccggtcaaatc
gatcgcatggatcgctttgccctgcgttttcgcgcccgtaaataccaaagcgagcagttc
cggttgccgtggagcggcctgcgtggtatccgtgccagcctgatcccacaccagttacat
atcgcttatgaagtgggtcagcgccacgcgccacgggtcttactggccgatgaagtgggg
ttgggtaaaaccatcgaagccgggatgattatccaccagcaactgctggctggccgtgct
gaacgggtgctgatcgtggtaccggagagcctgcaacaccagtggctagtagagatgtta
cgccgcttcaacctgcgcttctcactgtttgatgacagccgttattccgaagccttgttg
gacagtagcaatccgtttgataccgaacagatggtgatttgttcgctggattttgttcgt
cggaataagcagcggttagaacaactggccgatgcttcctgggatctgctggtggtggat
gaagcgcaccatatggcctggagtgaagaggctccaagccgcgaatatcaagtgattgaa
cagttggccgagcatatccccggcgtgctgttattgacagcaacaccagagcaattgggc
caacagagtcactttgcccgcctgcgtttgctggatccagatcgcttccatgattacgaa
gagttcgtcaatgaacaacagaaataccggcctatcgccgatgccgtcaccctgctgtta
gggggcgagcgtttaaccgatgataagctgaatctgttaggtgaactgattgatgaacaa
gatattgagccactactgaaagcggccaatagccaaagtgaagacagcgaagcggcgcgt
caagaattagttaccatgctgatggataggcacggtactagccgggtgctgttccgtaat
acccgtaatggggtaaaaggcttcccgcaccgcgtcttacaccaaattaagctgccattg
ccaacacagtaccaaactgcaattaaggtctctggcatcatgggggcgaagaaaaccctc
gacgctcgtgcaaaagatatgctttatcccgagcaaatctatcaggagtttgaaggcgaa
aacgccacctggtggaactttgacccacgggttgaatggctactgaactatttggttgcc
aaccggggtgagaaggtgttggtgatctgcgcacaagccgctacagctttgcagcttgaa
caagtgttacgtgagcgtgaagctattcgggccgccgtcttccatgaaggtttatcgctg
attgaacgtgaccgtgccgccgcctattttgcctcagaagaagatggtgctcaggtctta
ctgtgttccgaaattggttcagaggggcgtaacttccaatttgcctgccaactggtcatg
ttcgatttgccgttcaaccccgatctcctggagcaacgtattggccgtttggatcgtatc
ggccagaaccgtgaaatccagattatggtgccttatttggaagacaccgcgcaggcaata
ctggttcgttggtaccacgaagggttggatgcgttcgaacacacctgcccaacaggccgt
accatttatgacagcagctatcaggaactgattagctatttggccacgccaagtgagcag
gaagggttggatgagtttatccacacctgccgtcagcagcacgaagggttaaaacttcag
ttggaacagggccgtgaccgcttactggagatgcactctaacggtggcgaacatgggcag
gagctggcacagagcattgccgaacaagataatgacatcaatttagtcagttttgcactc
aacctgttcgatattgtcgggatcaaccaggaagatcgtagcgataacctgatcgtgctg
accccgtccgatcacatgctggtgcccgatttccccggtttgccaccagatggctgcacc
gtcacctttgatcgtgaacaggcactctcgcgggaagatgcccagtttgtcagttgggaa
caccccatcatccgcaatgggttggatttgatcctgtctggcgataccggcagttgcgcg
gtgtctttattgaaaaataaagccttacccgtcggtaccctgctggctgagttagtttac
gtggtcgaggcacaagcaccgaaacacttgcaactgacccgtttcttgccaccaacaccc
gtgcgtatgctcatggatcgcaacggcactaacctggcggcacaggttgaatttgaaagt
ttcaatcgccaactgaatgcggtaaaccgccatacctccagcaagctggtcaatgcggtt
cagcaagaagttcacaccatgttgcaacaagccgaagcactggtagaagcgcaagcgcag
gctctgattgaaacggcaaaacgcgaggccgatgataagttgagtactgaactggcgcgt
ctggaagcgttgaaagcggttaacccgaatattcgtgatgacgaaatagaggcgcttgag
cataaccgtaagatggtgctggaaaacctgaatcaagcaggctggcgtttagatgctatc
cggctggtggtggtaacacatcagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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