KEGG   Yersinia pestis El Dorado: CH46_3280
Entry
CH46_3280         CDS       T03719                                 
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
  KO
K02405  RNA polymerase sigma factor FliA
Organism
ypl  Yersinia pestis El Dorado
Pathway
ypl02020  Two-component system
ypl02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ypl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CH46_3280 (fliA)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CH46_3280 (fliA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ypl03021]
    CH46_3280 (fliA)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:ypl02035]
    CH46_3280 (fliA)
Transcription machinery [BR:ypl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CH46_3280 (fliA)
Bacterial motility proteins [BR:ypl02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    CH46_3280 (fliA)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 UPF0122 UPF0147
Other DBs
NCBI-ProteinID: AJJ13198
UniProt: A0A3G5L2U6
Position
complement(3582861..3583583)
AA seq 240 aa
MSDLYTAEGVMDKNSLWKRYVPLVRHEALRLQVRLPASVELDDLLQAGGIDLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWAPRSVRRNAREVASAMQQVEQRVGRPATEQEV
AQVLDIGLVEYRQILLDTNNSQLFSYDEWREEHGESVEPLLEGHEDANPLKHLLEGNLRQ
RVIDAIEALPEREKMVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRARLNNDA
NT seq 723 nt   +upstreamnt  +downstreamnt
gtgagtgatttgtataccgccgaaggcgtgatggataagaattccctctggaaacgctat
gttcctttggttcgccatgaagcattgcgtctacaggtgcgtctacccgccagcgtggag
ttggacgatttattgcaggctggggggattgacctgctgaatgctgtcgagcgctatgat
gctttacaaggcaccgcgtttactacgtatgcggtacagcgcatacggggggcgatgttg
gatgaactgcgtagccgtgattgggcgcctcgcagtgtgcgccgtaatgcacgggaagtg
gccagtgccatgcagcaagtcgaacagcgagtagggcgtccggcgaccgaacaggaagtc
gcgcaggttcttgatattggcttggttgagtaccgccagatcctgttggacaccaacaat
agccaacttttctcctacgacgaatggcgtgaagagcacggcgaaagtgtcgagcccctg
ttagaagggcatgaagatgccaatccactaaaacacttgttggaaggtaatctgcgtcag
cgcgtgattgacgcgatagaggcgttaccagaacgcgaaaaaatggtgcttacgttgtat
taccaggaagagctgaatttgaaagaaattggtgcggtgcttgaagttggggagtcccgc
gtcagtcaacttcacagccaagcgataaaacgcttacgcgcccgcctaaataacgacgct
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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