KEGG   Yersinia pestis El Dorado: CH46_4085
Entry
CH46_4085         CDS       T03719                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
ypl  Yersinia pestis El Dorado
Pathway
ypl03030  DNA replication
ypl03430  Mismatch repair
ypl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ypl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CH46_4085 (dnaE)
   03430 Mismatch repair
    CH46_4085 (dnaE)
   03440 Homologous recombination
    CH46_4085 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ypl03032]
    CH46_4085 (dnaE)
   03400 DNA repair and recombination proteins [BR:ypl03400]
    CH46_4085 (dnaE)
Enzymes [BR:ypl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CH46_4085 (dnaE)
DNA replication proteins [BR:ypl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CH46_4085 (dnaE)
DNA repair and recombination proteins [BR:ypl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CH46_4085 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP DNA_pol_IIIA_C HHH_6 tRNA_anti-codon MutS_II
Other DBs
NCBI-ProteinID: AJJ13203
UniProt: A0A3G5LAE2
Position
complement(4466067..4469549)
AA seq 1160 aa
MAEPRFVHLRVHSDYSMIDGLAKIGPLVKRAAALGMPALAITDFTNLCGLVKFYGSAHGA
GIKPIIGADFYVQSEILGDELAHLTVLARNNEGYQNLTLLISEAYQRGYGAAGPIIDRDW
LIKHKEGLILLSGGRMGDVGKFLLRGNQVQVDQCLAFYQEHFPDCYYLELIRTGRPDEEN
YLHAAVALATERGLPVVATNDVRFIDESDFDAHEIRVAIHDGFTLVDPKRPKNYSPQQFM
RDEEQMCELFADIPEALINSVEIAKRCNVTIRLGEYFLPQFPTGEMSTEDFLVEKAKQGL
EERLEFLFPDPEVRLQKRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDIDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPLDPGMTLEKAFAAEPQ
LAEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGNNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKTGLEPIDIASIPLEDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIEWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYSLGGADMLRRAMGKKNPAEM
AKQRSVFEDGAKNQGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAILEARKEGGYFKELFDLCARVDTKKLNKRILEKLIMSGAFDRLGPHRAALMS
SLGDALKAADQHAKAEAIGQVDMFGVLADAPEQVEQSYANVPPWQEQVVLDGERETLGLY
LTGHPITQYLKEIERYAGGMRLKDMHPTDRGKMTTAVGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALEKYQHLLEKDRILIATGQVSFDDFSGGLKMTARELMDISEAREKY
ASGLAISLTDRQIDDQLLNRLRQSLEPHRAGTIPVHLYYQREDARARLRFGATWRVTPTD
RLLIDLRTLVGNEQVELEFD
NT seq 3483 nt   +upstreamnt  +downstreamnt
atggccgaacctcgttttgtccacctgcgtgttcatagcgattattccatgatcgatgga
ttagctaagattggacctttggtgaaaagagctgctgcattaggtatgcctgctctggct
attaccgattttactaacctctgtggcctggtgaaattctacggcagcgcgcatggtgcg
gggattaaacccatcatcggtgctgacttctacgtacaaagtgaaatactgggtgatgaa
ttagctcacctcacggttttggctcgcaataatgaaggctatcaaaatctgactttattg
atctcagaagcctaccaacggggttatggcgctgcgggtcctatcattgatcgcgattgg
ctgatcaaacataaagaaggactcattctgctgtctggtggccgaatgggggatgtgggc
aaatttctgctacggggtaaccaggttcaggttgatcaatgtctcgccttttatcaggaa
cactttccagactgctattacctcgaacttattcgaaccgggcgtccagacgaagaaaac
tatcttcatgctgccgtggcattggccactgagcgtggtttacctgtcgttgcgaccaat
gatgtgcgttttattgatgaatcggattttgatgcccatgaaatccgtgtcgctatccat
gatggttttacattggtcgatcctaaacggccgaagaattacagccctcagcagtttatg
cgcgatgaagaacagatgtgtgagctgttcgctgatattccagaagcgttgatcaacagc
gttgagatagccaaacgctgtaatgtcactattcgccttggggaatatttcttaccgcag
ttccccacaggggagatgagtacagaagattttctggtagaaaaagccaaacaaggtttg
gaagaacgtttggaatttctgtttccggaccctgaggttaggctgcaaaaacggccagaa
tatgatgaacgtctggatatcgagctcaaagttatcaaccaaatgggcttccctggttac
ttcctgattgtaatggagtttatccagtggtcgaaagataacggcgtaccggtggggccg
gggcgtggctctggtgcaggctcattggtggcttatgccctgaaaattactgatattgac
ccactggaatttgatctactgttcgagcgcttccttaatccggaacgtgtatcgatgcct
gacttcgacgttgacttctgtatggagaaacgtgatctggtgatcgaacacgtggcggaa
atgtatggccgcgatgcggtttcccagataattaccttcggtaccatggcggctaaagcg
gtcatccgcgatgtcggccgtgtattaggccatccctatggctttgttgatcggatctca
aaattaatcccactcgatccggggatgacactggaaaaagcgtttgcagcggagccacag
ctagctgaaatttatgaagctgatgaagaggtcagggcgctaattgatatggcgcgtaag
ctggaaggagtaacgcgaaacgccgggaaacatgctggaggcgtggttattgcccccact
aagattaccgattttgccccactctattgtgatgcggaaggcaataacccagttacgcag
tttgataaaaatgatgtggaatatgctgggctggtgaagtttgacttcctcggtctacgt
acactaaccatcattaattgggcgttggagatgattaacgcccggcgcgctaaaactgga
ttggaacccattgatatcgcctctattccgctggaggataaaaaaagcttcgatatgctg
caacgttcggaaacgacagcagtattccagctggaatccagagggatgaaagacttgatc
aagcgcctgaagcccgactgcttcgaggacatgatcgccttagtggcgttatttcgtccc
ggtccgttacaatcagggatggttgataactttattgaccgtaaacacggccgggaagcg
atatcttacccagatattgagtggcaacatgaatccttgaaacctgtgcttgagccgacc
tacggcattatcttgtatcaggaacaggtcatgcaaattgcgcaggttctgtccggctac
tcactgggtggtgcggacatgttgcgtcgtgccatgggtaagaaaaaccctgctgagatg
gctaagcagcgttctgtatttgaagatggtgcgaaaaatcagggtattgatggtgagctg
gcgattaaaatctttgacctggttgagaaatttgcaggttacggttttaacaaatctcac
tcggcagcttatgcattagtctcctatcaaacgttgtggttaaaagcccattatccggct
gaatttatggctgcagtaatgaccgctgatatggataatacggacaaagtggtcggcttg
gtcgatgaatgctggcgtatggggctgaaaattctgccccctgacatcaacagcggtttg
taccatttccatgtaaacgatgatggcgaaattgtttatggtattggtgccattaaaggt
gtaggtgaggggccgatagaagccattctggaggcgcgtaaagaggggggctattttaaa
gagttatttgacctatgcgcccgtgtcgataccaaaaagcttaacaagcgtattttagaa
aaactgatcatgtccggtgcatttgaccgtttggggccacaccgtgcagcattgatgagt
tctctcggggatgcgcttaaagccgcagatcaacatgctaaagccgaagcaattggtcag
gtagatatgtttggtgtattagccgacgcgcctgagcaggttgagcaatcctatgccaat
gtgccgccatggcaggagcaggttgttttagatggtgaacgggaaacgctggggctgtat
ttaactggccatccgatcactcagtacctcaaggaaatcgaacgctatgccggtgggatg
cgtttgaaggatatgcatccgacggatcggggcaaaatgaccaccgcagtggggttggtg
atcgcggcaagggttatggtcacaaaacgtggtaatcgcattggtatttgtacgctagat
gaccgctctggtcgtctggaggtgatgttattcaccgatgcattggaaaaatatcagcat
ttattggaaaaagaccgtatcctgatagccaccggacaggtcagctttgatgactttagt
ggtgggcttaaaatgaccgcccgtgagttaatggacatcagtgaagctcgtgaaaaatat
gcaagtgggcttgctatctcgctgactgacaggcaaattgatgaccagcttttgaaccgt
ctccgtcagtcgttggaaccccatcgagcggggacgatcccagtacatctttattaccaa
cgggaagatgctcgcgcccggctgcggtttggagccacatggcgcgtgacgcccaccgat
cgcttattaatcgatttgcgaacgttggtaggtaatgagcaagtggaactggaatttgac
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system