KEGG   Yersinia pestis 91001 (biovar Microtus): YP_3176
Entry
YP_3176           CDS       T00165                                 
Symbol
rhlB
Name
(GenBank) putative DEAD-box helicase
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:3.6.4.13]
Organism
ypm  Yersinia pestis 91001 (biovar Microtus)
Pathway
ypm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ypm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    YP_3176 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ypm03019]
    YP_3176 (rhlB)
Messenger RNA biogenesis [BR:ypm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     YP_3176 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C AAA_22 CCDC138_C
Other DBs
NCBI-ProteinID: AAS63344
UniProt: Q8ZAD8
Position
complement(3544289..3545557)
AA seq 422 aa
MSKTHLTEQKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKT
LAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPSVDKRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPLQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRCIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILE
DFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA
CEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRLARTRTGNGPRRSGAPRNNRKR
PG
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgagcaaaacacacttgactgaacagaagttttccgacttcgccctgcacccgctagtt
gttgaagcccttgaaaacaaagggtttcagtattgcacgccgattcaggcgttagcattg
ccactcaccctctctgggcgtgatgtagcaggtcaggcgcaaaccggtacaggcaagacg
ctggcattcttggcgtctactttccattatttgctttctcacccagcagaagagggtcgc
cagactaatcaaccacgcgcattaattatggcaccaacgcgcgaattagccgtgcaaatt
cactccgatgcagaatcactttcccaggtaaccgggctgaagttaggtctggcttatggt
ggggatggctacgataaacagcttaaagtgctggaaagtggcgttgatatcttgatcggt
acaacaggccgtttaatcgattacgcgaaacaaaattatattaacctcggtgcgattcaa
gtcgtggtattggatgaagcggatcgcatgtacgatctaggctttattaaagatatccgc
tggctgttccgccgtatgccttccgttgataaacgtttaaatatgctgttttctgccact
ctctcgtatcgggtacgtgaattggcattcgaacaaatgaataatgcagaatatgttgaa
gtggaaccgttacaaaaaaccggtcaccgcatcaaagaagagctgttctatccttcaaat
gaagaaaaaatgcgtctgttacagacgttaattgaagaagaatggcctgatcgctgtatt
atttttgctaataccaaacaccgttgtgaagagatctgggggcatttggctgctgatggt
caccgcgtcggtttattgacgggtgatgttgctcagaaaaaacgcctgcgtattctcgaa
gatttcaccaagggcgatttggatattctggttgccaccgatgttgctgcccgtggttta
cacattccattagtgacccacgtcttcaactatgacctgccagatgactgtgaagattac
gttcaccgcattggccgtactggccgtgctggcgagagtggtcactccatcagtctggcc
tgcgaagagtatgcattaaacttgccagcgattgagacctatacgggccatagcatcccg
gtaagcaaatataacagtgacgcgctattaactgatctaccagcgcctaaacgcctagcc
cgtacccgcaccgggaatggcccacgccgcagtggagcaccacggaataaccgtaagcga
ccaggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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