KEGG   Yersinia pestis Nepal516 (biovar Antiqua): YPN_2916
Entry
YPN_2916          CDS       T00370                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ypn  Yersinia pestis Nepal516 (biovar Antiqua)
Pathway
ypn03030  DNA replication
ypn03430  Mismatch repair
ypn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ypn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    YPN_2916
   03430 Mismatch repair
    YPN_2916
   03440 Homologous recombination
    YPN_2916
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ypn03032]
    YPN_2916
   03400 DNA repair and recombination proteins [BR:ypn03400]
    YPN_2916
Enzymes [BR:ypn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     YPN_2916
DNA replication proteins [BR:ypn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     YPN_2916
DNA repair and recombination proteins [BR:ypn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     YPN_2916
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ABG19243
UniProt: A0A0H2YLH5
Position
complement(3273879..3274643)
AA seq 254 aa
MIITPTRQIVLDTETTGMNKLGVHYEGHRIIEIGAVEVINRRLTGRNFHVYVKPDRLVDP
EAYGVHGISDEFLADKPTFADITPEFLDFIRGAELVIHNAAFDIGFMDYEFRMLQQDIPK
TETFCTITDSLLMARRLFPGKRNNLDALCDRYQIDNTKRTLHGALLDAEILAEVYLAMTG
GQTSLTFSMEGEVSQNNASEDIQRITRPASALKIIYATEDELANHESRLDFVMKKGGSCL
WRMPLEAEEETKAE
NT seq 765 nt   +upstreamnt  +downstreamnt
atgatcattacaccgaccagacagattgttctggatactgaaactaccggtatgaataag
cttggcgttcattatgaaggccatcgtattattgaaatcggtgccgttgaagttatcaat
cgccgcctgaccggcagaaatttccatgtatatgtgaagcccgaccgtttggttgatcca
gaagcttacggggtgcacgggatcagcgatgagtttttggctgacaagccaacatttgct
gatattacgccggagtttttagattttatccgtggcgctgaattagtcatccataatgct
gcgtttgatatcggctttatggattacgagttccggatgttgcagcaagatattccgaaa
acggagaccttctgtactatcactgatagcctgttgatggctcgccgcttatttcccggt
aagcggaataaccttgatgccctgtgtgatcgctatcagatagataataccaaacgaacc
ttgcacggtgcgttacttgatgccgagattctggctgaagtttatttagcaatgactggc
gggcagacatcgctaactttctccatggaaggcgaagtgtcgcagaataacgcgtctgaa
gatattcaacgcattactcgcccagcatcggcattgaaaattatctatgctaccgaggat
gaattggctaatcatgaatcccgtttggattttgtgatgaaaaagggcggcagttgcctg
tggcggatgccgcttgaggcagaagaagagacaaaagcagaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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