KEGG   Yersinia pestis Nepal516 (biovar Antiqua): YPN_3754
Entry
YPN_3754          CDS       T00370                                 
Name
(GenBank) colicin V processing peptidase. Cysteine peptidase. MEROPS family C39
  KO
K13409  ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
Organism
ypn  Yersinia pestis Nepal516 (biovar Antiqua)
Pathway
ypn02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:ypn00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    YPN_3754
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ypn01002]
    YPN_3754
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ypn02000]
    YPN_3754
   02044 Secretion system [BR:ypn02044]
    YPN_3754
Peptidases and inhibitors [BR:ypn01002]
 Cysteine peptidases
  Family C39
   YPN_3754
Transporters [BR:ypn02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    YPN_3754
Secretion system [BR:ypn02044]
 Type I secretion system
  RaxAB-RaxC type I secretion system protein
   YPN_3754
SSDB
Motif
Pfam: ABC_membrane Peptidase_C39 ABC_tran SMC_N AAA_21 AAA_29 AAA_16 AAA_14 AAA SbcC_Walker_B AAA_22 NTPase_1 Peptidase_C70 nSTAND3 NACHT AAA_24 Guanylate_cyc_2 AAA_30 Mg_chelatase RsgA_GTPase ATPase_2 AAA_23 NB-ARC DUF87 TsaE AAA_28
Other DBs
NCBI-ProteinID: ABG20081
UniProt: A0A0H2YNM1
Position
4306452..4308566
AA seq 704 aa
MNDTHFNEIKNRLNFSFRRKVPQVLQTEAAECGLACLVMTCRYHGMDIDLFNLRQRFGIS
SHGATLALLINISAQLKFKTRALSLDLDELRQLKTPCILHWDMSHFVVLVAVKGTRFIIH
DPAFGRRTVSLSEMSQHFTGVALELWPNSEFTRQKSRTRLSLLSLMRNISGLPGFLTKIF
CLSLMVEAINLLLPVGTQLVMDHVIIAEDYDLLALICIGLLFFILFRTFLSMLRSWTSLV
MGSLVDVQWKAGLFDHLLKLPLAYFEKRKLGDIQSRFGSLDIIRSTLTNNVVNGIIDGLM
SIGVFIMMFLYGGWLVWVVLGFTAMYMILRLATYNQYRQASEEQIVKNAKASSHFMETLY
GISTLKALGLAATRSQFWLNLNIDTTNANIRLTKLDMFFGGVNTLIGTIDQVVILWLGAS
MVIDGQMTLGMFVAFNAYRGQFSDRATNLINMVLQLRMLALHSERIADIVFTETEKEQTP
RQLLSPNQPAVFEARNIAFQYDNLSKPIFSDLNIHVEAGESVAITGPSGIGKTTLMKVIA
GLLTPSQGHILIDGLDITTVGLNNYRDCIACVLQDDKLFAGSIADNIASFDVNKDEQRIL
SCANHCNIHKEIMHMPMGYETLISELGGSLSGGQKQRLLIARALYRQPSLLFLDEATSHL
DLANEAHINNAIASLKITRIFIAHRPSTIASAQRIINLEKQNVS
NT seq 2115 nt   +upstreamnt  +downstreamnt
atgaatgatacgcattttaacgagataaaaaaccgtctgaattttagctttcgtcgtaaa
gtcccacaggtgcttcaaaccgaagcagcagaatgcggacttgcctgtctggtaatgaca
tgccgctaccatgggatggatatagatttatttaatttacgccaacgttttggtatttct
tctcatggcgcaacattagcgctgttaattaatatctcagcacaacttaagtttaaaacc
cgtgctttatcactggatttagatgagttacgccaattaaaaacaccctgtatattgcat
tgggatatgagccattttgtcgtccttgttgcagtgaagggcacccggtttattattcac
gacccggcatttggccggcgtactgtcagcctaagtgagatgtcacagcattttaccggt
gtcgcactggaattatggcctaacagtgaatttacccgccaaaaaagccgtacccgttta
agcctattatcactgatgcgtaatatcagcggcttacctggctttctgacaaaaatattt
tgcttatcgttaatggtcgaggccattaacctactgctaccggtaggaactcagttggtc
atggaccatgtgatcattgccgaggactatgacctattagcattgatttgtatcggcctg
cttttctttattctgttccgcacgtttttaagtatgttgcgatcgtggacatcgctggtt
atggggtctttagttgatgtgcaatggaaggcgggtttatttgatcatctactcaaatta
cctttggcttattttgaaaaacgtaaactgggcgatattcagtcacggtttggctccctc
gatatcatacgttcaacattaaccaacaatgtggtcaacggcatcattgacggtctaatg
tctattggcgtgtttatcatgatgtttttgtatggtggctggctggtttgggtggtactt
ggttttaccgccatgtacatgatcctgcgccttgccacttataatcaataccgtcaggct
tccgaagagcaaattgtaaaaaatgccaaagccagctctcattttatggaaacactttat
ggcatcagtacgcttaaggccctggggctggcagcaacacgctcacaattttggctcaat
ctaaacatagacacgaccaatgccaatatccgactgactaagttagatatgttttttggc
ggcgtaaacacactgatcggcaccatcgatcaagttgtcatcttatggctaggcgcgtcg
atggtgattgatgggcaaatgacattaggtatgtttgttgcctttaatgcttatcgggga
caattttctgatcgggcaaccaacttgatcaatatggtgttgcaactccgtatgcttgcc
ttgcacagtgagcgtattgccgacattgttttcaccgaaaccgaaaaagaacagaccccc
agacaactgctttcacccaatcaacctgcggtctttgaagctcgaaacattgcttttcaa
tatgacaatctgtcaaaacctattttttctgatttgaacattcacgttgaagcgggtgag
agtgtggcgattactggcccatcgggtataggaaaaaccacgttgatgaaagtgatagcc
gggctgctgacaccttcacaggggcatattctgattgatgggctggatataacgacggtc
ggcctgaataattatcgtgattgcattgcctgcgtgctccaggatgacaagctgttcgca
ggttccatcgctgacaacattgccagttttgatgtcaacaaagatgagcagcgtattctt
tcctgtgctaatcattgcaatatacataaagaaattatgcatatgccgatgggttatgaa
acgttgattagtgagcttggaggcagtttatcgggcgggcagaagcaacgtttattgatt
gccagagcgttgtatcgtcaacctagtttactgtttctggacgaggcaacaagtcatctg
gacttagcaaacgaagcacatatcaataatgcgatagcctcactgaagatcacccgtatt
tttatcgcccatcgtccttcaacgatagccagtgcccagcgtattattaatctggaaaaa
caaaacgtatcgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (36)   

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