KEGG   Yersinia pestis Nepal516 (biovar Antiqua): YPN_3921
Entry
YPN_3921          CDS       T00370                                 
Name
(GenBank) penicillin-binding protein
  KO
K05366  penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
Organism
ypn  Yersinia pestis Nepal516 (biovar Antiqua)
Pathway
ypn00550  Peptidoglycan biosynthesis
ypn01100  Metabolic pathways
ypn01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:ypn00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    YPN_3921
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    YPN_3921
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:ypn01003]
    YPN_3921
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ypn01011]
    YPN_3921
Enzymes [BR:ypn01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     YPN_3921
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     YPN_3921
Glycosyltransferases [BR:ypn01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   YPN_3921
Peptidoglycan biosynthesis and degradation proteins [BR:ypn01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   YPN_3921
SSDB
Motif
Pfam: Transgly PCB_OB Transpeptidase DUF3502
Other DBs
NCBI-ProteinID: ABG20248
UniProt: A0A0H2YNG8
Position
4457342..4459897
AA seq 851 aa
MKFVKYFLILAVCCILLGAASIFGLYKYIEPQLPDVATLKDIRLQTPMQVYSAEGELIAQ
FGEKRRIPLTLNQIPPEMVHAFIATEDSRFYDHHGVDPVGILRAVSIAMLSGRASQGAST
ITQQLARNFFLSPERTLMRKIKEAFLAIRIEQMLTKDEILELYLNKIYLGYRAYGVGAAA
QVYFGKEVHELTLSQIAMIAGLPKAPSTFNPLYSHDRAVARRNVVLLRMLDEKYITQAQY
DQARSEELVANYHVPQIAFSAPYLAEMVRQEMIKRYGENAYTDGYQVYTTITRKLQLAAV
DSLRANVLAYDMRHGYRGPSNVLWKVGESAWSREQIIDSLKALPVYGPLLPAVVTEADAA
QATAMLADGSNVTLPMVGIRWARPFKSDNAQGPVPKKATDVVQPGQQIWVRKVDDNWWLA
QVPDVNSALVSIDPNNGAIKALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAMDKGL
TLATILNDLPITRWDSGAGTDWRPKNSPPTYDGPIRLRQGLGQSKNVVMVRAMRAMGVDY
AAEYLQRFGFPAQNIVHSESLALGSASFTPLQLVRGYAVLANGGYLVDPYFITKITDDVG
NVLFETKPKVVCDNCNLPVIYGDTQRSVVLSDDNIENVATSQNQNASNVPMPELEQVTPA
QTTLNSEQQYAPHVISTPLAFLMRDALNSNIFGEPGWMGTGWRAGRDLKRKDIGGKTGTT
NSSKDAWFSGYGPDTVTSVWIGFDDHRRNLGRSTASGAIPDQISGAEGGAKTAQPAWNDF
MKVALEGLPEKQVPPPPGIVSVVIDKQTGKLSNGGPGSRSEYFIDGTQPTEHTVHEVGTT
LMDNGQTHELF
NT seq 2556 nt   +upstreamnt  +downstreamnt
gtgaagttcgtaaagtattttttaatccttgcggtgtgttgcattttactgggagcagcc
tcgatatttggcctgtacaaatatattgagccgcagctacccgatgttgccacgctgaaa
gacatccggctgcaaacacctatgcaggtgtatagcgccgaaggcgaattgatcgctcaa
ttcggcgaaaaacgtcgtatcccattgacgttgaatcaaataccaccagaaatggtgcat
gcgtttatcgccacagaagacagccgtttttacgatcatcacggtgtcgaccctgtgggg
atcctgcgtgcagtctctatcgccatgttgtctggtcgcgcctcccaaggggcgagtacc
attacccagcaattggcgaggaacttctttttaagccctgaacggactttgatgcgaaaa
atcaaggaagcatttctggctatccgcatcgaacagatgctgaccaaagatgaaatcctt
gagctgtatctgaacaaaatttatctcggttaccgcgcctatggtgtcggtgctgcggcc
caagtctatttcggcaaagaagtccatgaattgaccctcagccaaatagcgatgatcgcc
gggttacctaaagcgccttctacgtttaacccgctctactcacatgacagagccgtggca
cggcgtaatgtggtgctgctacgtatgctggatgaaaaatacatcactcaggcgcaatac
gatcaagcccgcagtgaagagttggtggctaactaccatgtaccgcaaatcgccttttca
gcgccctatctggctgaaatggtgcgtcaggagatgattaaacgttacggtgaaaatgcg
tataccgacggttatcaggtctataccacgattaccagaaagctacagttggcggcagtt
gattcattacgcgccaacgtgctggcttatgatatgcgccatggctatcgcggcccgtcc
aatgtgttatggaaggtgggcgaaagtgcctggagccgtgaacagattatcgattcactg
aaagcattgccggtgtatggcccgctgttacctgcagtagtcaccgaggcggatgccgca
caagctacggcaatgctggctgatggcagcaacgtgaccttgccgatggtcggtatacgg
tgggcgcgtccgtttaaatcggataacgcccaaggtccggtccccaaaaaagcgactgat
gtcgttcagcctggtcagcaaatttgggtcagaaaggtcgatgataactggtggctggct
caagtgccggacgtcaattctgcgctggtgtctatcgatcccaataacggtgcaattaaa
gcgctagtaggcggttttgattttaaccaaagcaaatttaaccgggcaacgcaggcactg
cgtcaggttggctcgaatattaagccattcctgtataccgccgcgatggacaaaggcctg
acgctggccactatcctcaatgacctgccaatcacccgttgggattctggcgcaggcacc
gactggcggccaaaaaactcacctcccacttacgatggccctatccgtttgcgtcagggt
ttaggccaatcgaaaaacgtggtcatggtgcgggcaatgcgggccatgggggtggattac
gcggctgagtatttgcagcgctttggtttccctgcgcagaatatcgtgcattcagaatca
ctggctctgggttctgcctcctttacaccattacagctagtccgtggctatgccgtgcta
gcaaatggcggttacctggttgatccgtacttcatcactaaaatcactgatgatgtcggt
aatgttctgtttgaaacaaagccgaaggttgtctgtgataactgtaacttgccggtcatt
tacggtgatacccaacgttcagttgtactttctgacgacaatattgagaacgttgcaacc
tcgcagaaccagaatgccagtaacgtgccaatgccagagctggaacaggtgacaccggca
caaacgacgctaaatagcgaacagcaatatgcgccacacgtgataagcaccccgctggcg
ttcttgatgcgtgatgcattgaattctaatattttcggggaacctggctggatgggtacg
ggctggcgtgcgggtcgtgacctgaaacgtaaggatatcggcggtaaaacgggtacgaca
aacagctcgaaggatgcctggttctccggctacggcccagataccgtgacatccgtctgg
attggctttgatgaccatcgccgtaatttgggccgcagcacggcatcaggggcgatacca
gaccaaatttccggagcagaaggcggggcgaagacggcccagccagcatggaatgacttt
atgaaggtggcgcttgagggcttgccagagaagcaggttccaccaccaccgggtatcgtc
agtgtcgtgattgataagcaaacaggcaagttatctaatggcgggccgggcagccgctca
gagtactttatcgacgggacacaacccactgagcatacggtacatgaagttggtaccaca
ttgatggataacggccagactcacgaactgttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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