KEGG   Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_0554
Entry
YPDSF_0554        CDS       T00505                                 
Name
(GenBank) ornithine decarboxylase
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
ypp  Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp00330  Arginine and proline metabolism
ypp00480  Glutathione metabolism
ypp01100  Metabolic pathways
ypp01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:ypp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    YPDSF_0554
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    YPDSF_0554
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    YPDSF_0554
Enzymes [BR:ypp01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     YPDSF_0554
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C OKR_DC_1_N Beta_elim_lyase
Other DBs
NCBI-ProteinID: ABP38964
Position
619062..621389
AA seq 775 aa
MLRPVHLSLRRVFPPGKRAHLMTSIYRHCISAPHSVMSSICQNGSLIPDRLRVSDMTLLK
IATSARLASYVETQRGVVYLNQTDFTDVAAVVMSVEDANAGILSMLHDLGFAIPAFIAVT
AEQTVSADYLPLIKGVITLGEANKAFYNAQVEAAASEYQKNLLPPFFSTLKKYVEMNNST
FACPGHQGGEFFRKHPAGRQFFEFYGETIFRSDMCNADVKLGDLLIHEGAAKDAQKYAAK
VFNADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLETA
RNPFGFIGGIDAHCFNEDYLRQQLREVAPERAEEARPFRLAIIQLGTYDGTVYNARQVVD
SIGHLCDYILFDSAWVGYEQFIPMMKDFSPLLLELNENDPGIIVTQSVHKQQAGFSQTSQ
VHKKDNHIKGQKRHCNHKRFNNAFMLHASTSPFYPLFAALDVNAKIHSGDSGRRMWMDCV
KLGIETRKSLLARCSMLRPFIPPVVGGKNWQDYATDVIANDARFFNFVPDERWHGFEGYN
QDQYLVDPCKLLLTTPGIDASTGRYTSFGIPAAILATFLRENGIVPEKCDLNSILFLLTP
AENTAKMAHLVDMLVQFERYVEQDAKLCDVLPTIYRKNEERYHGYTLRQLCQEMHDLYVS
HDVKQLQKDMFRKASFPQVVMNPQDANIQFIRDNIELIPIAEAEGRIAAEGALPYPPGVL
CVVPGEVWGGAVQRYFLALEEGINLLPGFSPELQGVYIEKGDVSWRRIFGYVITQ
NT seq 2328 nt   +upstreamnt  +downstreamnt
atgctgagaccagttcacctatcactcaggcgtgtatttccgccggggaaacgtgcgcat
ttaatgacatcaatttaccggcattgcatcagtgctccgcactctgtgatgtcatcgata
tgccaaaatggcagcctcatacctgaccgtctgagagtaagtgatatgacactattaaaa
atagcaacaagcgcccgcctggcttcttatgtagaaactcagcgcggagtggtgtacctc
aatcagactgactttactgatgttgccgcggtggtaatgtcggttgaagatgcaaatgcg
ggtatattgtcaatgctgcatgaccttggttttgctattcctgcgtttattgccgtgacg
gcagaacagacggtctctgctgattatttgcccttgattaaaggtgtcattacgcttggt
gaagcaaataaagctttttataacgctcaggtagaagctgccgccagtgaatatcaaaag
aatctcttaccgccttttttctcaacactgaaaaaatatgtcgagatgaataactcgacc
tttgcttgccctggccatcaggggggcgaattttttcgcaagcatcctgcaggacgccag
ttttttgaattctacggtgagacgatttttcgttcagatatgtgtaatgccgatgtcaaa
ttaggtgatttacttatccatgaaggggcggcaaaagatgcacagaaatatgctgctaag
gtattcaatgccgataaaacctattttgtcctgaacggtacctcggcggccaacaaggtc
gtgaccaacgctttactgacccgtggtgatttagtgttgtttgaccgcaataaccataaa
tctaaccatcatggtgcgctgatccaggcgggcgcgacgccggtttatctggaaacggcc
cgtaacccctttggttttattggtggtattgatgcgcactgcttcaatgaagattattta
cgtcaacaactgcgtgaagttgctcccgagcgtgcagaagaggctcggccattccgatta
gcgatcattcaattgggtacctacgacggtacggtatataacgcccgccaagtagttgat
agtattggtcatttatgcgattacattttgtttgattctgcttgggtgggttacgaacaa
tttattccgatgatgaaggatttctcaccgttattactggaattaaatgaaaatgaccct
gggattattgtgactcaatcggtacacaagcagcaggccggtttttctcagacctctcag
gtacataaaaaagataatcacattaaaggacagaaacgtcactgtaaccataagcgtttt
aataatgcctttatgttgcatgcatcgaccagtccgttttatccattatttgcggcattg
gatgttaatgccaaaatacactctggtgacagtggccgccgtatgtggatggattgtgta
aaactcggtattgaaacccgtaaatcgttattggcacgctgttcgatgttacggcctttt
attcctccagttgttggcggtaaaaattggcaagattatgctactgatgtgattgccaat
gatgcgcgcttctttaattttgtcccagatgaacgctggcatggatttgagggatataac
caagatcagtatttggttgatccgtgcaaattattgctgacgacgccgggaattgatgcc
agtactggccgatatacttcgtttggtattccggcggctattttggcgactttcctgcgt
gaaaatggaattgtgccagaaaaatgtgatcttaactcgatcctattcctgctgaccccg
gcagaaaataccgccaaaatggcacacctggtggatatgttggtgcagtttgaacgctat
gttgaacaagatgcgaagctgtgtgatgtattaccgacgatctatcgtaagaatgaagag
cgttatcacggttataccttgcgtcagttatgccaagaaatgcatgacctgtacgtcagc
catgacgttaagcaattgcaaaaggatatgttccgtaaagccagtttcccgcaggtagtc
atgaacccgcaagacgccaatattcagtttatccgcgataatattgagttgattcctatt
gctgaagctgaaggccgtattgccgccgaaggcgctttgccttatccaccgggtgtgctg
tgtgtggtgcccggtgaagtgtggggtggggcggttcagcgttattttctggcgctggaa
gaggggattaacttactgccgggcttttcacctgagttacagggcgtttatatcgaaaaa
ggtgatgtgtcttggcggcgtatctttggttatgtgattacgcaatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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